Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TM9SF4Q92544 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.8□□□□□ -1.48
TM9SF4Q92544 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.8□□□□□ -1.48
TM9SF4Q92544 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.8□□□□□ -1.48
TM9SF4Q92544 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.8□□□□□ -1.48
TM9SF4Q92544 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.8□□□□□ -1.48
TM9SF4Q92544 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.8□□□□□ -1.48
TM9SF4Q92544 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.8□□□□□ -1.48
TM9SF4Q92544 AC005332.4-201ENST00000592752 579 ntBASIC5.8□□□□□ -1.48
TM9SF4Q92544 AC011445.2-201ENST00000599274 173 ntBASIC5.8□□□□□ -1.48
TM9SF4Q92544 AL049840.6-201ENST00000604583 345 ntBASIC5.8□□□□□ -1.48
TM9SF4Q92544 AL133406.3-201ENST00000606817 541 ntBASIC5.8□□□□□ -1.48
TM9SF4Q92544 U1.25-201ENST00000614085 162 ntBASIC5.8□□□□□ -1.48
TM9SF4Q92544 U1.34-201ENST00000618578 162 ntBASIC5.8□□□□□ -1.48
TM9SF4Q92544 U1.31-201ENST00000620022 160 ntBASIC5.8□□□□□ -1.48
TM9SF4Q92544 FO681491.1-202ENST00000623392 737 ntBASIC5.8□□□□□ -1.48
TM9SF4Q92544 AC009120.7-201ENST00000623452 780 ntBASIC5.8□□□□□ -1.48
TM9SF4Q92544 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.8□□□□□ -1.48
TM9SF4Q92544 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TM9SF4Q92544 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TM9SF4Q92544 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.8□□□□□ -1.48
TM9SF4Q92544 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TM9SF4Q92544 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
TM9SF4Q92544 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.8□□□□□ -1.48
TM9SF4Q92544 AC137056.2-201ENST00000624055 1958 ntBASIC5.8□□□□□ -1.48
TM9SF4Q92544 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TM9SF4Q92544 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TM9SF4Q92544 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TM9SF4Q92544 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.8□□□□□ -1.48
TM9SF4Q92544 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
TM9SF4Q92544 AL137141.1-201ENST00000624622 4836 ntBASIC5.79□□□□□ -1.48
TM9SF4Q92544 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 AC011455.2-201ENST00000599320 3336 ntBASIC5.79□□□□□ -1.48
TM9SF4Q92544 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 AC123769.1-201ENST00000530992 3192 ntBASIC5.79□□□□□ -1.48
TM9SF4Q92544 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 NPM1P10-201ENST00000398310 865 ntBASIC5.79□□□□□ -1.48
TM9SF4Q92544 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TM9SF4Q92544 HMGA1P8-201ENST00000414130 321 ntBASIC5.79□□□□□ -1.48
TM9SF4Q92544 RPS26P38-201ENST00000414476 348 ntBASIC5.79□□□□□ -1.48
TM9SF4Q92544 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 AC066692.1-201ENST00000421721 457 ntBASIC5.79□□□□□ -1.48
TM9SF4Q92544 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TM9SF4Q92544 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 VN1R38P-201ENST00000450265 887 ntBASIC5.79□□□□□ -1.48
TM9SF4Q92544 AL133351.3-201ENST00000454998 193 ntBASIC5.79□□□□□ -1.48
TM9SF4Q92544 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 SNX18P26-201ENST00000458433 740 ntBASIC5.79□□□□□ -1.48
TM9SF4Q92544 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 RNA5SP271-201ENST00000516700 88 ntBASIC5.79□□□□□ -1.48
TM9SF4Q92544 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 NANOGNBP2-201ENST00000544753 553 ntBASIC5.79□□□□□ -1.48
TM9SF4Q92544 AC125612.1-201ENST00000547580 377 ntBASIC5.79□□□□□ -1.48
TM9SF4Q92544 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 RPA2P1-201ENST00000556557 721 ntBASIC5.79□□□□□ -1.48
TM9SF4Q92544 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TM9SF4Q92544 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
TM9SF4Q92544 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TM9SF4Q92544 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TM9SF4Q92544 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 AC006600.2-201ENST00000624834 2506 ntBASIC5.79□□□□□ -1.48
TM9SF4Q92544 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TM9SF4Q92544 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TM9SF4Q92544 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TM9SF4Q92544 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TM9SF4Q92544 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TM9SF4Q92544 KARSP1-201ENST00000451871 1752 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TM9SF4Q92544 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TM9SF4Q92544 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TM9SF4Q92544 MIR323A-201ENST00000362199 86 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TM9SF4Q92544 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms