Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC1.84□□□□□ -2.11
SYNE1Q8NF91 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC1.84□□□□□ -2.11
SYNE1Q8NF91 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC1.84□□□□□ -2.11
SYNE1Q8NF91 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 AL161912.4-201ENST00000623889 2468 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 MIR143-201ENST00000385300 106 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 PSMC1P2-201ENST00000423961 1204 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 NDUFA5P12-201ENST00000503796 343 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 LAPTM4BP2-201ENST00000604542 446 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 MIR7155-201ENST00000615925 56 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 AC116631.1-202ENST00000640984 683 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 AC005725.1-201ENST00000577346 2607 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 MRE11P1-201ENST00000464884 2127 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 RNU105B-201ENST00000364478 208 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 AC091153.1-201ENST00000466297 402 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 IGKV1D-22-201ENST00000518953 324 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 AC020937.1-201ENST00000519677 1013 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 MIR1273E-201ENST00000581165 102 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 RN7SKP103-201ENST00000363848 320 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 RPSAP39-201ENST00000467439 883 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 AC021269.1-201ENST00000526860 705 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC1.84□□□□□ -2.12
SYNE1Q8NF91 PDZK1P1-202ENST00000425209 1350 ntBASIC1.84□□□□□ -2.12
SYNE1Q8NF91 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AL359263.1-201ENST00000441188 2796 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 OR9L1P-201ENST00000529493 933 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AL049779.2-201ENST00000553847 315 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 RPA2P1-201ENST00000556557 721 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 RFPL4AP6-201ENST00000616792 846 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC116667.2-201ENST00000641075 823 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC005261.2-201ENST00000593427 4258 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 MIR323A-201ENST00000362199 86 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 RN7SKP115-201ENST00000363177 317 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 SNORA56-201ENST00000383966 129 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 SRSF1P1-201ENST00000424058 520 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 CCNB1IP1P1-201ENST00000428976 839 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC026254.2-201ENST00000475295 371 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 RN7SL714P-201ENST00000487050 298 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 RN7SKP98-201ENST00000517070 156 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms