Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AL353807.4-201ENST00000604995 257 ntBASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 MIR6811-201ENST00000620409 58 ntBASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 AC096708.4-201ENST00000620563 552 ntBASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 MUC2-202ENST00000613187 4845 ntBASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 MTCO1P15-201ENST00000529569 1526 ntBASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 CR383656.5-201ENST00000547616 1340 ntBASIC4.96□□□□□ -1.62
CCDC71LQ8N9Z2 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AC004023.1-201ENST00000561473 1744 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AL138820.1-201ENST00000617901 5305 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 RNA5SP346-201ENST00000363541 121 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 Y_RNA.209-201ENST00000364156 111 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AL353133.1-201ENST00000407695 401 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 RN7SKP117-201ENST00000410175 264 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 RNU2-18P-201ENST00000411224 162 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 RPS27AP6-201ENST00000427962 448 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 NPM1P23-201ENST00000440193 849 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AL356133.1-201ENST00000444762 372 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AC068491.1-201ENST00000449539 1241 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 HIGD1AP16-201ENST00000450986 258 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AL603882.1-201ENST00000463059 681 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 RN7SL197P-201ENST00000466981 299 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 PFN1P6-201ENST00000476786 399 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 MTCO1P55-201ENST00000489829 745 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AC083795.1-201ENST00000491760 320 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AP000859.1-201ENST00000525536 307 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 MIR4258-201ENST00000580920 91 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AC026898.1-201ENST00000586404 571 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 uc_338.26-201ENST00000612659 160 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AC073575.2-201ENST00000614212 627 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 DLST-216ENST00000626051 252 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 SAMMSON-213ENST00000641336 1521 ntBASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC71LQ8N9Z2 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 ZNF710-AS1-202ENST00000620791 2133 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AC009962.1-201ENST00000567327 3813 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 TCP11X1-202ENST00000622971 1372 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 HSPD1P7-201ENST00000447985 1686 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms