Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 RNU6-462P-201ENST00000362659 105 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 SNORD86-201ENST00000391196 86 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 HCG21-204ENST00000419481 605 ntTSL 3 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AL590094.1-203ENST00000435649 828 ntTSL 5 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 FUNDC2P4-201ENST00000441207 421 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 ARMC8P1-201ENST00000443069 1289 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 RPL39P6-201ENST00000448289 150 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 RN7SL508P-201ENST00000464472 303 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 KCNAB1-AS1-201ENST00000467794 456 ntTSL 2 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 RN7SL841P-201ENST00000470547 297 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 MTCO2P4-201ENST00000517968 247 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 IGLVI-68-201ENST00000519525 345 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AP002748.2-201ENST00000528671 348 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 OR4A45P-201ENST00000529954 901 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 SLC2A13P1-201ENST00000531560 322 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AC034102.1-201ENST00000552016 604 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AC116348.1-201ENST00000562525 528 ntTSL 3 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AC093249.5-201ENST00000568120 430 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AC009101.1-201ENST00000568135 242 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 MIR5008-201ENST00000584300 94 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AC243960.5-201ENST00000597858 255 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AL117336.2-201ENST00000602435 335 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AC073218.2-201ENST00000606468 295 ntTSL 5 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 LINC02018-202ENST00000608707 445 ntTSL 3 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 CARMN-212ENST00000614896 536 ntTSL 5 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AC018692.2-201ENST00000624130 348 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AC012100.3-201ENST00000624738 575 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 CRYM-AS1-204ENST00000637983 556 ntBASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 XRCC6P2-201ENST00000457831 1822 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AL031985.3-201ENST00000565390 2449 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 OR52E6-202ENST00000379946 954 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 ARF1P1-201ENST00000406466 544 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms