Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LINC00346Q8IVM7 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
LINC00346Q8IVM7 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LINC00346Q8IVM7 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LINC00346Q8IVM7 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.54□□□□□ -1.52
LINC00346Q8IVM7 AC011416.1-201ENST00000514947 1732 ntBASIC5.54□□□□□ -1.52
LINC00346Q8IVM7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.54□□□□□ -1.52
LINC00346Q8IVM7 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LINC00346Q8IVM7 AL136984.1-201ENST00000607611 1893 ntBASIC5.54□□□□□ -1.52
LINC00346Q8IVM7 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LINC00346Q8IVM7 MTCO1P15-201ENST00000529569 1526 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AL451142.1-201ENST00000375867 775 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 MTATP6P11-201ENST00000428071 670 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC079922.1-201ENST00000443291 359 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 RANP2-201ENST00000456833 229 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC073594.1-201ENST00000462065 364 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC022730.1-201ENST00000473114 568 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 RN7SL369P-201ENST00000477138 299 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC018639.1-201ENST00000492994 442 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC021146.7-201ENST00000509604 775 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC122134.1-201ENST00000565664 1104 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC040174.2-201ENST00000602701 465 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC084373.1-201ENST00000603311 235 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 RPL23AP61-201ENST00000623642 466 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC073592.7-201ENST00000623659 507 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC079298.2-201ENST00000623885 459 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC133552.1-201ENST00000569988 4007 ntBASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
LINC00346Q8IVM7 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 AC096921.2-201ENST00000561507 1916 ntBASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 UGT2B26P-201ENST00000508672 1613 ntBASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 SNORD51.1-201ENST00000365405 77 ntBASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 RNU4-64P-201ENST00000410795 131 ntBASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 HMGA1P8-201ENST00000414130 321 ntBASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 AC007562.1-201ENST00000421819 517 ntBASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 GPN3P1-201ENST00000423883 535 ntBASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 RPS26P4-201ENST00000431743 355 ntBASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 WDR82P2-201ENST00000444540 928 ntBASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 AC023274.2-201ENST00000445264 521 ntBASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 RARRES2P3-201ENST00000457739 473 ntBASIC5.52□□□□□ -1.53
LINC00346Q8IVM7 RN7SL502P-201ENST00000481857 290 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms