Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AP001267.4-201ENST00000602598 545 ntBASIC5.53□□□□□ -1.52
C11orf88Q6PI97 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.53□□□□□ -1.52
C11orf88Q6PI97 AC023813.4-201ENST00000607580 580 ntBASIC5.53□□□□□ -1.52
C11orf88Q6PI97 AF117829.2-201ENST00000619538 361 ntBASIC5.53□□□□□ -1.52
C11orf88Q6PI97 MIR7854-201ENST00000620068 65 ntBASIC5.53□□□□□ -1.52
C11orf88Q6PI97 AP001005.3-201ENST00000622049 129 ntBASIC5.53□□□□□ -1.52
C11orf88Q6PI97 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.53□□□□□ -1.52
C11orf88Q6PI97 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.53□□□□□ -1.52
C11orf88Q6PI97 AL355834.1-201ENST00000556602 3965 ntBASIC5.53□□□□□ -1.52
C11orf88Q6PI97 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.53□□□□□ -1.52
C11orf88Q6PI97 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
C11orf88Q6PI97 AC092724.1-201ENST00000624623 3397 ntBASIC5.53□□□□□ -1.52
C11orf88Q6PI97 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.53□□□□□ -1.52
C11orf88Q6PI97 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.53□□□□□ -1.52
C11orf88Q6PI97 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
C11orf88Q6PI97 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.53□□□□□ -1.52
C11orf88Q6PI97 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 DLEU2L-201ENST00000371086 3555 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AC144833.1-201ENST00000567953 4089 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 RNA5SP382-201ENST00000363355 112 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 MIR191-201ENST00000384873 92 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 RNA5SP176-201ENST00000390956 110 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AL034374.1-201ENST00000406329 351 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AC096632.2-201ENST00000438139 1239 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 MORF4L1P4-201ENST00000450245 976 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 RPL7L1P3-201ENST00000455249 689 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 SNX18P26-201ENST00000458433 740 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 RN7SL216P-201ENST00000471607 298 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 RN7SL836P-201ENST00000476140 296 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AC090058.1-201ENST00000498788 435 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AL671862.1-201ENST00000515851 349 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 RNA5SP278-201ENST00000517055 102 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AC073916.1-201ENST00000545095 130 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AL359976.1-201ENST00000418655 3528 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 PPBPP2-201ENST00000513150 1362 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AL359955.1-201ENST00000455242 3275 ntBASIC5.52□□□□□ -1.53
C11orf88Q6PI97 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.52□□□□□ -1.53
C11orf88Q6PI97 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
C11orf88Q6PI97 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
C11orf88Q6PI97 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
C11orf88Q6PI97 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
C11orf88Q6PI97 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
C11orf88Q6PI97 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.51□□□□□ -1.53
C11orf88Q6PI97 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
C11orf88Q6PI97 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
C11orf88Q6PI97 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.51□□□□□ -1.53
C11orf88Q6PI97 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.51□□□□□ -1.53
C11orf88Q6PI97 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
C11orf88Q6PI97 AC023245.2-201ENST00000530760 2978 ntBASIC5.51□□□□□ -1.53
C11orf88Q6PI97 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
C11orf88Q6PI97 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
C11orf88Q6PI97 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms