Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM71Q2Q1W2 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM71Q2Q1W2 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.77□□□□□ -1.33
TRIM71Q2Q1W2 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 OR11H13P-201ENST00000359695 979 ntBASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 MIR323A-201ENST00000362199 86 ntBASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 U3.25-201ENST00000391209 220 ntBASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 AL139039.2-201ENST00000407436 479 ntBASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 AL355355.1-201ENST00000442900 793 ntBASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 AC092865.1-201ENST00000544395 1023 ntBASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 AL731537.2-201ENST00000561565 951 ntBASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 AC092474.3-201ENST00000603022 568 ntBASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 AL645933.2-201ENST00000606743 1207 ntBASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 AC008833.1-201ENST00000611633 691 ntBASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 OR7A1P-202ENST00000641542 1158 ntBASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 AC105235.1-201ENST00000623208 1816 ntBASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM71Q2Q1W2 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AL136531.3-201ENST00000624378 3658 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AC127070.3-201ENST00000503695 3263 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AL096829.1-201ENST00000413677 457 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 BMS1P13-201ENST00000417301 885 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AL356806.1-201ENST00000422524 916 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 SETP10-201ENST00000424368 814 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 SUMO2P3-201ENST00000438311 288 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AC016908.1-201ENST00000442571 1219 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 BMS1P10-201ENST00000443754 1120 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AC092967.1-201ENST00000449016 481 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 GEMIN2P1-201ENST00000454246 752 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 RPS26P39-201ENST00000469206 341 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AC092865.4-201ENST00000477936 615 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 SNORD95-201ENST00000579879 68 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AC119501.1-201ENST00000603646 475 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 RPL12P48-201ENST00000605620 304 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AL352984.2-202ENST00000613699 155 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AP000432.2-201ENST00000624164 2048 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AL513548.1-201ENST00000562904 1724 ntBASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM71Q2Q1W2 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms