Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.09□□□□□ -1.27
PDS5AQ29RF7 RN7SL787P-201ENST00000613000 284 ntBASIC7.09□□□□□ -1.27
PDS5AQ29RF7 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDS5AQ29RF7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDS5AQ29RF7 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDS5AQ29RF7 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PDS5AQ29RF7 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
PDS5AQ29RF7 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.09□□□□□ -1.28
PDS5AQ29RF7 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 MTND4LP17-201ENST00000414607 293 ntBASIC7.08□□□□□ -1.28
PDS5AQ29RF7 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 AC002504.1-201ENST00000438281 691 ntBASIC7.08□□□□□ -1.28
PDS5AQ29RF7 AC015983.1-201ENST00000441577 373 ntBASIC7.08□□□□□ -1.28
PDS5AQ29RF7 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 LRRC37A14P-201ENST00000452297 462 ntBASIC7.08□□□□□ -1.28
PDS5AQ29RF7 AL603882.1-201ENST00000463059 681 ntBASIC7.08□□□□□ -1.28
PDS5AQ29RF7 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 AC022215.1-201ENST00000481770 362 ntBASIC7.08□□□□□ -1.28
PDS5AQ29RF7 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 MIR4260-201ENST00000583107 67 ntBASIC7.08□□□□□ -1.28
PDS5AQ29RF7 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 AC018659.2-201ENST00000624690 715 ntBASIC7.08□□□□□ -1.28
PDS5AQ29RF7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 HSPD1P8-201ENST00000400121 1658 ntBASIC7.08□□□□□ -1.28
PDS5AQ29RF7 AP002833.3-201ENST00000625075 2265 ntBASIC7.08□□□□□ -1.28
PDS5AQ29RF7 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
PDS5AQ29RF7 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 RNA5SP242-201ENST00000364171 118 ntBASIC7.07□□□□□ -1.28
PDS5AQ29RF7 AL596448.1-201ENST00000415024 392 ntBASIC7.07□□□□□ -1.28
PDS5AQ29RF7 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 RPL6P21-201ENST00000418672 846 ntBASIC7.07□□□□□ -1.28
PDS5AQ29RF7 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 FRG2FP-204ENST00000453982 852 ntBASIC7.07□□□□□ -1.28
PDS5AQ29RF7 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 AC114982.2-201ENST00000461396 358 ntBASIC7.07□□□□□ -1.28
PDS5AQ29RF7 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 RPSAP37-201ENST00000470913 821 ntBASIC7.07□□□□□ -1.28
PDS5AQ29RF7 AC138866.2-201ENST00000508650 584 ntBASIC7.07□□□□□ -1.28
PDS5AQ29RF7 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 IGBP1P1-201ENST00000554337 1009 ntBASIC7.07□□□□□ -1.28
PDS5AQ29RF7 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 AC087565.3-203ENST00000641018 837 ntBASIC7.07□□□□□ -1.28
PDS5AQ29RF7 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 AL121768.1-201ENST00000613917 2544 ntBASIC7.07□□□□□ -1.28
PDS5AQ29RF7 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 AC068769.1-201ENST00000474767 2426 ntBASIC7.07□□□□□ -1.28
PDS5AQ29RF7 AL161901.1-201ENST00000624954 3425 ntBASIC7.07□□□□□ -1.28
PDS5AQ29RF7 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
PDS5AQ29RF7 EIF3EP2-201ENST00000423042 1814 ntBASIC7.07□□□□□ -1.28
PDS5AQ29RF7 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDS5AQ29RF7 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.06□□□□□ -1.28
PDS5AQ29RF7 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDS5AQ29RF7 AL451142.1-201ENST00000375867 775 ntBASIC7.06□□□□□ -1.28
PDS5AQ29RF7 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDS5AQ29RF7 U3.25-201ENST00000391209 220 ntBASIC7.06□□□□□ -1.28
PDS5AQ29RF7 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDS5AQ29RF7 AL391422.1-201ENST00000402155 436 ntBASIC7.06□□□□□ -1.28
PDS5AQ29RF7 AL451046.1-201ENST00000406097 534 ntBASIC7.06□□□□□ -1.28
PDS5AQ29RF7 RNU4-64P-201ENST00000410795 131 ntBASIC7.06□□□□□ -1.28
PDS5AQ29RF7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.06□□□□□ -1.28
PDS5AQ29RF7 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.06□□□□□ -1.28
PDS5AQ29RF7 AC079355.1-201ENST00000421770 223 ntBASIC7.06□□□□□ -1.28
PDS5AQ29RF7 AC019205.1-201ENST00000421830 730 ntBASIC7.06□□□□□ -1.28
PDS5AQ29RF7 HSPE1P27-201ENST00000430808 296 ntBASIC7.06□□□□□ -1.28
PDS5AQ29RF7 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.06□□□□□ -1.28
PDS5AQ29RF7 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.06□□□□□ -1.28
PDS5AQ29RF7 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.06□□□□□ -1.28
PDS5AQ29RF7 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.06□□□□□ -1.28
PDS5AQ29RF7 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7.06□□□□□ -1.28
PDS5AQ29RF7 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC7.06□□□□□ -1.28
PDS5AQ29RF7 RPSAP39-201ENST00000467439 883 ntBASIC7.06□□□□□ -1.28
PDS5AQ29RF7 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.06□□□□□ -1.28
PDS5AQ29RF7 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms