Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.7□□□□□ -1.5
LTBQ06643 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.7□□□□□ -1.5
LTBQ06643 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.7□□□□□ -1.5
LTBQ06643 AC118282.1-201ENST00000506408 765 ntBASIC5.7□□□□□ -1.5
LTBQ06643 AC113398.2-201ENST00000507630 558 ntBASIC5.7□□□□□ -1.5
LTBQ06643 AC106806.2-201ENST00000509365 500 ntBASIC5.7□□□□□ -1.5
LTBQ06643 OR51A1P-201ENST00000511110 946 ntBASIC5.7□□□□□ -1.5
LTBQ06643 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.7□□□□□ -1.5
LTBQ06643 RN7SKP67-201ENST00000515905 235 ntBASIC5.7□□□□□ -1.5
LTBQ06643 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.7□□□□□ -1.5
LTBQ06643 SUMO2P19-201ENST00000518920 295 ntBASIC5.7□□□□□ -1.5
LTBQ06643 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.7□□□□□ -1.5
LTBQ06643 OR4A40P-201ENST00000533878 948 ntBASIC5.7□□□□□ -1.5
LTBQ06643 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.7□□□□□ -1.5
LTBQ06643 AC002519.2-203ENST00000567043 837 ntBASIC5.7□□□□□ -1.5
LTBQ06643 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.7□□□□□ -1.5
LTBQ06643 AC090826.1-203ENST00000569235 490 ntBASIC5.7□□□□□ -1.5
LTBQ06643 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.7□□□□□ -1.5
LTBQ06643 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.7□□□□□ -1.5
LTBQ06643 CLIC4P2-201ENST00000601934 717 ntBASIC5.7□□□□□ -1.5
LTBQ06643 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.7□□□□□ -1.5
LTBQ06643 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.7□□□□□ -1.5
LTBQ06643 AL135999.3-201ENST00000610501 812 ntBASIC5.7□□□□□ -1.5
LTBQ06643 AC109809.1-201ENST00000619665 545 ntBASIC5.7□□□□□ -1.5
LTBQ06643 AC006249.1-201ENST00000621223 471 ntBASIC5.7□□□□□ -1.5
LTBQ06643 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.7□□□□□ -1.5
LTBQ06643 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.7□□□□□ -1.5
LTBQ06643 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 AC125238.2-201ENST00000430003 1440 ntBASIC5.7□□□□□ -1.5
LTBQ06643 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
LTBQ06643 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.7□□□□□ -1.5
LTBQ06643 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 SMG1P5-202ENST00000529428 4219 ntBASIC5.7□□□□□ -1.5
LTBQ06643 SMG1P2-201ENST00000566127 4221 ntBASIC5.7□□□□□ -1.5
LTBQ06643 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.7□□□□□ -1.5
LTBQ06643 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LTBQ06643 AOX3P-204ENST00000491025 2107 ntBASIC5.69□□□□□ -1.5
LTBQ06643 MTND4P21-201ENST00000453886 1357 ntBASIC5.69□□□□□ -1.5
LTBQ06643 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
LTBQ06643 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
LTBQ06643 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LTBQ06643 AL136984.1-201ENST00000607611 1893 ntBASIC5.69□□□□□ -1.5
LTBQ06643 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LTBQ06643 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.69□□□□□ -1.5
LTBQ06643 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LTBQ06643 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LTBQ06643 AC003045.1-201ENST00000398779 713 ntBASIC5.69□□□□□ -1.5
LTBQ06643 RN7SKP144-201ENST00000411108 279 ntBASIC5.69□□□□□ -1.5
LTBQ06643 HMGN1P20-201ENST00000411849 300 ntBASIC5.69□□□□□ -1.5
LTBQ06643 DHFRP2-201ENST00000414224 547 ntBASIC5.69□□□□□ -1.5
LTBQ06643 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.69□□□□□ -1.5
LTBQ06643 AC245884.2-201ENST00000426257 404 ntBASIC5.69□□□□□ -1.5
LTBQ06643 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.69□□□□□ -1.5
LTBQ06643 RPS7P14-201ENST00000426405 583 ntBASIC5.69□□□□□ -1.5
LTBQ06643 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.69□□□□□ -1.5
LTBQ06643 MTATP6P17-201ENST00000431030 672 ntBASIC5.69□□□□□ -1.5
LTBQ06643 AL136455.1-201ENST00000441083 1240 ntBASIC5.69□□□□□ -1.5
LTBQ06643 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.69□□□□□ -1.5
LTBQ06643 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.69□□□□□ -1.5
LTBQ06643 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.69□□□□□ -1.5
LTBQ06643 AC010374.2-201ENST00000512933 535 ntBASIC5.69□□□□□ -1.5
LTBQ06643 CCNHP1-201ENST00000513311 678 ntBASIC5.69□□□□□ -1.5
LTBQ06643 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.69□□□□□ -1.5
LTBQ06643 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.69□□□□□ -1.5
LTBQ06643 IGHV4-55-201ENST00000520889 368 ntBASIC5.69□□□□□ -1.5
LTBQ06643 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LTBQ06643 OR4H6P-201ENST00000563771 921 ntBASIC5.69□□□□□ -1.5
LTBQ06643 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LTBQ06643 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.69□□□□□ -1.5
LTBQ06643 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.69□□□□□ -1.5
LTBQ06643 AL589765.6-201ENST00000601909 549 ntBASIC5.69□□□□□ -1.5
LTBQ06643 AC242628.1-201ENST00000606810 391 ntBASIC5.69□□□□□ -1.5
LTBQ06643 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.69□□□□□ -1.5
LTBQ06643 AL512506.1-201ENST00000613918 449 ntBASIC5.69□□□□□ -1.5
LTBQ06643 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.69□□□□□ -1.5
LTBQ06643 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LTBQ06643 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
LTBQ06643 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LTBQ06643 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LTBQ06643 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LTBQ06643 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LTBQ06643 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
LTBQ06643 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.69□□□□□ -1.5
LTBQ06643 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.69□□□□□ -1.5
LTBQ06643 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.69□□□□□ -1.5
LTBQ06643 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LTBQ06643 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LTBQ06643 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LTBQ06643 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.68□□□□□ -1.5
LTBQ06643 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LTBQ06643 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.68□□□□□ -1.5
LTBQ06643 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LTBQ06643 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms