Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC3.45□□□□□ -1.86
HSPG2P98160 VDAC2P4-201ENST00000452925 711 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 ACA64.4-201ENST00000459070 127 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 snoU13.20-201ENST00000459180 104 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HSPG2P98160 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 AL021368.3-201ENST00000607119 578 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.45□□□□□ -1.86
HSPG2P98160 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 AL359922.2-201ENST00000581788 3017 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 SPATA31B1P-201ENST00000434692 4016 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 MYH11-203ENST00000452625 6886 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HSPG2P98160 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HSPG2P98160 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC3.45□□□□□ -1.86
HSPG2P98160 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HSPG2P98160 AC008957.3-201ENST00000624112 2242 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 KLHL3-201ENST00000309755 6806 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 ZNF733P-202ENST00000444809 1573 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HSPG2P98160 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
HSPG2P98160 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC3.45□□□□□ -1.86
HSPG2P98160 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 C4BPAP2-201ENST00000428434 478 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 MIR4715-201ENST00000584117 79 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 AC099654.6-201ENST00000636487 512 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HSPG2P98160 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.45□□□□□ -1.86
HSPG2P98160 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
HSPG2P98160 AC022893.2-201ENST00000564832 3296 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 TSC22D2-201ENST00000361875 11154 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 CLCN4-202ENST00000380833 6750 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC3.45□□□□□ -1.86
HSPG2P98160 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC3.45□□□□□ -1.86
HSPG2P98160 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC3.45□□□□□ -1.86
HSPG2P98160 RN7SKP6-201ENST00000364795 319 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
HSPG2P98160 LINC01881-201ENST00000416103 412 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.45□□□□□ -1.86
HSPG2P98160 LDHAP2-201ENST00000437325 985 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC3.45□□□□□ -1.86
HSPG2P98160 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.45□□□□□ -1.86
HSPG2P98160 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 BMPR1APS2-201ENST00000527904 1012 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC3.45□□□□□ -1.86
HSPG2P98160 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
HSPG2P98160 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HSPG2P98160 MIR92B-201ENST00000607575 96 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 MBP-206ENST00000397863 4800 ntTSL 3 BASIC3.45□□□□□ -1.86
HSPG2P98160 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC3.45□□□□□ -1.86
HSPG2P98160 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC3.45□□□□□ -1.86
HSPG2P98160 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
HSPG2P98160 PIK3C2B-202ENST00000367187 7686 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HSPG2P98160 AL050305.1-201ENST00000399993 1230 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 AC104634.1-201ENST00000452720 462 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 PPM1AP1-201ENST00000502740 1135 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC3.44□□□□□ -1.86
HSPG2P98160 AC053481.3-201ENST00000577881 843 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC3.44□□□□□ -1.86
HSPG2P98160 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC3.44□□□□□ -1.86
HSPG2P98160 AL512782.1-201ENST00000603093 364 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 AC137695.1-201ENST00000604126 489 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 AC024589.2-201ENST00000605642 1294 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC3.44□□□□□ -1.86
HSPG2P98160 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 MYO5A-202ENST00000358212 12220 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HSPG2P98160 MYO5A-206ENST00000399233 12220 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HSPG2P98160 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HSPG2P98160 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC3.44□□□□□ -1.86
HSPG2P98160 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC3.44□□□□□ -1.86
HSPG2P98160 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 AC104447.1-201ENST00000624214 2124 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC3.44□□□□□ -1.86
HSPG2P98160 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms