Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBA52P62987 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
UBA52P62987 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.23□□□□□ -1.57
UBA52P62987 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
UBA52P62987 COX6B1P3-201ENST00000312310 260 ntBASIC5.23□□□□□ -1.57
UBA52P62987 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
UBA52P62987 RN7SKP78-201ENST00000364711 318 ntBASIC5.23□□□□□ -1.57
UBA52P62987 AL139805.1-201ENST00000407837 289 ntBASIC5.23□□□□□ -1.57
UBA52P62987 AL359092.1-201ENST00000417156 265 ntBASIC5.23□□□□□ -1.57
UBA52P62987 MTND2P12-201ENST00000417560 1252 ntBASIC5.23□□□□□ -1.57
UBA52P62987 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.23□□□□□ -1.57
UBA52P62987 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.23□□□□□ -1.57
UBA52P62987 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.23□□□□□ -1.57
UBA52P62987 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.23□□□□□ -1.57
UBA52P62987 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.23□□□□□ -1.57
UBA52P62987 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBA52P62987 AC092967.1-201ENST00000449016 481 ntBASIC5.23□□□□□ -1.57
UBA52P62987 RPS27AP3-201ENST00000453803 454 ntBASIC5.23□□□□□ -1.57
UBA52P62987 AC068228.1-201ENST00000461723 211 ntBASIC5.23□□□□□ -1.57
UBA52P62987 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.23□□□□□ -1.57
UBA52P62987 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.23□□□□□ -1.57
UBA52P62987 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.23□□□□□ -1.57
UBA52P62987 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBA52P62987 IGKV3D-34-201ENST00000522638 302 ntBASIC5.23□□□□□ -1.57
UBA52P62987 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.23□□□□□ -1.57
UBA52P62987 AL133399.1-201ENST00000527476 298 ntBASIC5.23□□□□□ -1.57
UBA52P62987 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.23□□□□□ -1.57
UBA52P62987 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.23□□□□□ -1.57
UBA52P62987 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBA52P62987 AC090826.1-203ENST00000569235 490 ntBASIC5.23□□□□□ -1.57
UBA52P62987 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.23□□□□□ -1.57
UBA52P62987 AC004890.3-201ENST00000605566 1095 ntBASIC5.23□□□□□ -1.57
UBA52P62987 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.23□□□□□ -1.57
UBA52P62987 AL096712.1-201ENST00000614561 159 ntBASIC5.23□□□□□ -1.57
UBA52P62987 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.23□□□□□ -1.57
UBA52P62987 AC073488.6-201ENST00000632293 754 ntBASIC5.23□□□□□ -1.57
UBA52P62987 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UBA52P62987 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UBA52P62987 AC114774.1-201ENST00000507410 1770 ntBASIC5.23□□□□□ -1.57
UBA52P62987 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UBA52P62987 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.23□□□□□ -1.57
UBA52P62987 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.23□□□□□ -1.57
UBA52P62987 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
UBA52P62987 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBA52P62987 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UBA52P62987 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.23□□□□□ -1.57
UBA52P62987 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.23□□□□□ -1.57
UBA52P62987 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.23□□□□□ -1.57
UBA52P62987 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.23□□□□□ -1.57
UBA52P62987 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.23□□□□□ -1.57
UBA52P62987 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
UBA52P62987 AC005005.4-201ENST00000623789 16698 ntBASIC5.22□□□□□ -1.57
UBA52P62987 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.22□□□□□ -1.57
UBA52P62987 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
UBA52P62987 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
UBA52P62987 AL136984.1-201ENST00000607611 1893 ntBASIC5.22□□□□□ -1.57
UBA52P62987 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.22□□□□□ -1.57
UBA52P62987 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
UBA52P62987 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
UBA52P62987 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.22□□□□□ -1.57
UBA52P62987 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
UBA52P62987 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.22□□□□□ -1.57
UBA52P62987 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
UBA52P62987 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
UBA52P62987 TCP11X1-202ENST00000622971 1372 ntBASIC5.22□□□□□ -1.57
UBA52P62987 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
UBA52P62987 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
UBA52P62987 RN7SKP69-201ENST00000365390 305 ntBASIC5.22□□□□□ -1.57
UBA52P62987 RNU11-6P-201ENST00000391127 133 ntBASIC5.22□□□□□ -1.57
UBA52P62987 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.22□□□□□ -1.57
UBA52P62987 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.22□□□□□ -1.57
UBA52P62987 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.22□□□□□ -1.57
UBA52P62987 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.22□□□□□ -1.57
UBA52P62987 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.22□□□□□ -1.57
UBA52P62987 AC011411.1-201ENST00000509592 876 ntBASIC5.22□□□□□ -1.57
UBA52P62987 CYP4F27P-201ENST00000514557 494 ntBASIC5.22□□□□□ -1.57
UBA52P62987 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.22□□□□□ -1.57
UBA52P62987 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.22□□□□□ -1.57
UBA52P62987 AC027216.1-201ENST00000577726 685 ntBASIC5.22□□□□□ -1.57
UBA52P62987 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.22□□□□□ -1.57
UBA52P62987 AC010487.1-201ENST00000594408 1172 ntBASIC5.22□□□□□ -1.57
UBA52P62987 AL049840.5-201ENST00000602827 552 ntBASIC5.22□□□□□ -1.57
UBA52P62987 AP001437.1-201ENST00000608783 456 ntBASIC5.22□□□□□ -1.57
UBA52P62987 AC005277.2-201ENST00000617898 390 ntBASIC5.22□□□□□ -1.57
UBA52P62987 AC026124.2-201ENST00000621847 656 ntBASIC5.22□□□□□ -1.57
UBA52P62987 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.22□□□□□ -1.57
UBA52P62987 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.22□□□□□ -1.57
UBA52P62987 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.22□□□□□ -1.57
UBA52P62987 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
UBA52P62987 AC239868.2-201ENST00000564237 4527 ntBASIC5.22□□□□□ -1.57
UBA52P62987 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
UBA52P62987 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
UBA52P62987 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
UBA52P62987 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.22□□□□□ -1.57
UBA52P62987 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.22□□□□□ -1.57
UBA52P62987 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
UBA52P62987 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
UBA52P62987 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
UBA52P62987 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
UBA52P62987 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms