Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN20P56880 RNU6-883P-201ENST00000384597 107 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 RNU6-316P-201ENST00000391027 107 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 GCNT1P4-201ENST00000404096 329 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 RN7SKP108-201ENST00000411367 328 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN20P56880 UBE2V1P14-201ENST00000415815 558 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN20P56880 AL590399.2-201ENST00000427536 309 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN20P56880 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN20P56880 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN20P56880 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.65□□□□□ -1.5
CLDN20P56880 VPS25P1-201ENST00000455691 508 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.65□□□□□ -1.5
CLDN20P56880 RPL37P23-201ENST00000492641 294 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 AC122718.2-201ENST00000505325 591 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 AC091874.2-201ENST00000505889 720 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.65□□□□□ -1.5
CLDN20P56880 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN20P56880 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.65□□□□□ -1.5
CLDN20P56880 AC010343.2-201ENST00000510162 224 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 AC108103.1-201ENST00000511286 446 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.65□□□□□ -1.5
CLDN20P56880 AC104997.1-201ENST00000519761 717 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN20P56880 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN20P56880 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN20P56880 AC107958.1-201ENST00000556576 290 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.65□□□□□ -1.5
CLDN20P56880 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN20P56880 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.65□□□□□ -1.5
CLDN20P56880 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN20P56880 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.65□□□□□ -1.5
CLDN20P56880 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN20P56880 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN20P56880 AC009032.1-201ENST00000617574 431 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN20P56880 AL357140.4-201ENST00000636827 412 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.65□□□□□ -1.51
CLDN20P56880 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN20P56880 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
CLDN20P56880 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN20P56880 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CLDN20P56880 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CLDN20P56880 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CLDN20P56880 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CLDN20P56880 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CLDN20P56880 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.65□□□□□ -1.51
CLDN20P56880 AC093671.1-201ENST00000624981 2929 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN20P56880 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN20P56880 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
CLDN20P56880 AC018717.1-201ENST00000457712 1505 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CLDN20P56880 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLDN20P56880 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN20P56880 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN20P56880 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN20P56880 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN20P56880 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN20P56880 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CLDN20P56880 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN20P56880 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN20P56880 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 SNORA40.4-201ENST00000390971 128 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLDN20P56880 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLDN20P56880 AL512504.1-201ENST00000415494 778 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 AL354868.1-201ENST00000417077 482 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN20P56880 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN20P56880 CR848007.2-201ENST00000424918 787 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 AL354707.3-201ENST00000427308 331 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 RPL5P2-201ENST00000429598 854 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 RPSAP65-201ENST00000429660 595 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN20P56880 AC010240.2-201ENST00000445363 1205 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN20P56880 AL022237.1-201ENST00000446663 358 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 AC103563.5-201ENST00000455643 364 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 AL445687.2-201ENST00000458156 728 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 CTSLP6-201ENST00000458273 1002 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN20P56880 AP002453.1-201ENST00000492327 668 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 RPL37AP8-201ENST00000494116 276 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 MAST4-IT1-201ENST00000514241 658 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 HSD3BP3-201ENST00000514706 994 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 AC117525.1-201ENST00000515228 503 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 OR8K2P-201ENST00000524645 927 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 AC084121.1-201ENST00000533882 835 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN20P56880 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN20P56880 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN20P56880 AC093524.1-201ENST00000564266 1094 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 MIR4502-201ENST00000580432 81 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 AP005136.2-201ENST00000583253 1049 ntBASIC5.64□□□□□ -1.51
CLDN20P56880 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CLDN20P56880 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN20P56880 GLYATL1P2-202ENST00000588046 902 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms