Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CLDN6P56747 AC022034.1-201ENST00000512867 2156 ntBASIC5.82□□□□□ -1.48
CLDN6P56747 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
CLDN6P56747 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.81□□□□□ -1.48
CLDN6P56747 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN6P56747 AC235565.1-201ENST00000456962 1325 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN6P56747 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.81□□□□□ -1.48
CLDN6P56747 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN6P56747 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.81□□□□□ -1.48
CLDN6P56747 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN6P56747 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CLDN6P56747 OR11H13P-201ENST00000359695 979 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 SNORA64.1-201ENST00000362600 132 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 RN7SKP77-201ENST00000363261 353 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 RNA5SP394-201ENST00000364216 119 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.81□□□□□ -1.48
CLDN6P56747 MIR105-2-201ENST00000385083 81 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.81□□□□□ -1.48
CLDN6P56747 AL662874.1-201ENST00000426065 230 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 AC245884.2-201ENST00000426257 404 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 NANOGP4-201ENST00000427230 913 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.81□□□□□ -1.48
CLDN6P56747 AC002504.1-201ENST00000438281 691 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 AC009237.1-201ENST00000442127 744 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 AL163193.1-201ENST00000444895 788 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.81□□□□□ -1.48
CLDN6P56747 GEMIN2P1-201ENST00000454246 752 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 SIAH1P1-201ENST00000479411 923 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 AC008953.1-201ENST00000497334 318 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.81□□□□□ -1.48
CLDN6P56747 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.81□□□□□ -1.48
CLDN6P56747 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.81□□□□□ -1.48
CLDN6P56747 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN6P56747 MIR4505-201ENST00000582238 73 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
CLDN6P56747 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.81□□□□□ -1.48
CLDN6P56747 AC097467.4-201ENST00000605504 141 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CLDN6P56747 AC078880.4-201ENST00000617627 1749 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.81□□□□□ -1.48
CLDN6P56747 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN6P56747 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN6P56747 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CLDN6P56747 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN6P56747 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN6P56747 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN6P56747 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN6P56747 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN6P56747 AC006213.6-201ENST00000623722 4179 ntBASIC5.81□□□□□ -1.48
CLDN6P56747 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CLDN6P56747 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.8□□□□□ -1.48
CLDN6P56747 AC123769.1-201ENST00000530992 3192 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN6P56747 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CLDN6P56747 CCNT2P1-201ENST00000423082 1315 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN6P56747 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN6P56747 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CLDN6P56747 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN6P56747 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN6P56747 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN6P56747 RNU1-19P-201ENST00000363306 165 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 U3.7-201ENST00000363668 216 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 MIR143-201ENST00000385300 106 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 SPTLC1P2-201ENST00000407089 121 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.8□□□□□ -1.48
CLDN6P56747 RN7SKP59-201ENST00000410520 314 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 AL353626.3-201ENST00000413399 657 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 RPL35AP24-201ENST00000413846 330 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 NPM1P4-201ENST00000414095 812 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.8□□□□□ -1.48
CLDN6P56747 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.8□□□□□ -1.48
CLDN6P56747 AC073594.1-201ENST00000462065 364 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN6P56747 RN7SL57P-201ENST00000493687 290 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.8□□□□□ -1.48
CLDN6P56747 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.8□□□□□ -1.48
CLDN6P56747 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.8□□□□□ -1.48
CLDN6P56747 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.8□□□□□ -1.48
CLDN6P56747 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN6P56747 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.8□□□□□ -1.48
CLDN6P56747 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.8□□□□□ -1.48
CLDN6P56747 AL356801.1-201ENST00000559320 294 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.8□□□□□ -1.48
CLDN6P56747 AC018558.5-201ENST00000565840 952 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.8□□□□□ -1.48
CLDN6P56747 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
CLDN6P56747 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.8□□□□□ -1.48
CLDN6P56747 SUMO2P15-201ENST00000604285 278 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 AC024255.1-201ENST00000614376 102 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 AL445670.1-201ENST00000618889 801 ntBASIC5.8□□□□□ -1.48
CLDN6P56747 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN6P56747 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN6P56747 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.8□□□□□ -1.48
CLDN6P56747 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN6P56747 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN6P56747 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CLDN6P56747 AP001541.1-201ENST00000623322 1904 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms