Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
SMARCA2P51531 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC10.23□□□□□ -0.77
SMARCA2P51531 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SMARCA2P51531 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SMARCA2P51531 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SMARCA2P51531 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC10.23□□□□□ -0.77
SMARCA2P51531 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC10.23□□□□□ -0.77
SMARCA2P51531 MGST2-204ENST00000506797 634 ntTSL 2 BASIC10.23□□□□□ -0.77
SMARCA2P51531 AC074255.1-201ENST00000511259 501 ntBASIC10.23□□□□□ -0.77
SMARCA2P51531 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC10.23□□□□□ -0.77
SMARCA2P51531 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SMARCA2P51531 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC10.23□□□□□ -0.77
SMARCA2P51531 AC027334.1-201ENST00000603257 310 ntBASIC10.23□□□□□ -0.77
SMARCA2P51531 AL022394.1-201ENST00000606979 292 ntBASIC10.23□□□□□ -0.77
SMARCA2P51531 AC091953.3-201ENST00000623220 236 ntBASIC10.23□□□□□ -0.77
SMARCA2P51531 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SMARCA2P51531 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SMARCA2P51531 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
SMARCA2P51531 AL391261.1-201ENST00000555712 1479 ntBASIC10.23□□□□□ -0.77
SMARCA2P51531 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC10.23□□□□□ -0.77
SMARCA2P51531 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SMARCA2P51531 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC10.23□□□□□ -0.77
SMARCA2P51531 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC10.23□□□□□ -0.77
SMARCA2P51531 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC10.23□□□□□ -0.77
SMARCA2P51531 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA2P51531 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA2P51531 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA2P51531 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
SMARCA2P51531 AC091390.1-201ENST00000433904 331 ntBASIC10.22□□□□□ -0.77
SMARCA2P51531 PA2G4P6-201ENST00000438325 1197 ntBASIC10.22□□□□□ -0.77
SMARCA2P51531 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC10.22□□□□□ -0.77
SMARCA2P51531 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA2P51531 PRELID3BP5-201ENST00000508612 460 ntBASIC10.22□□□□□ -0.77
SMARCA2P51531 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC10.22□□□□□ -0.77
SMARCA2P51531 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC10.22□□□□□ -0.77
SMARCA2P51531 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC10.22□□□□□ -0.77
SMARCA2P51531 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC10.22□□□□□ -0.77
SMARCA2P51531 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC10.22□□□□□ -0.77
SMARCA2P51531 AC011840.5-201ENST00000582125 771 ntBASIC10.22□□□□□ -0.77
SMARCA2P51531 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC10.22□□□□□ -0.77
SMARCA2P51531 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC10.22□□□□□ -0.77
SMARCA2P51531 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC10.22□□□□□ -0.77
SMARCA2P51531 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA2P51531 AL590004.4-201ENST00000566733 7060 ntBASIC10.22□□□□□ -0.77
SMARCA2P51531 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC10.22□□□□□ -0.77
SMARCA2P51531 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA2P51531 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA2P51531 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SMARCA2P51531 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC10.22□□□□□ -0.77
SMARCA2P51531 AC005618.1-201ENST00000606901 3148 ntBASIC10.22□□□□□ -0.77
SMARCA2P51531 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA2P51531 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA2P51531 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC10.22□□□□□ -0.77
SMARCA2P51531 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA2P51531 ADIG-201ENST00000373348 430 ntTSL 2 BASIC10.22□□□□□ -0.77
SMARCA2P51531 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA2P51531 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
SMARCA2P51531 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA2P51531 NIFKP3-201ENST00000417799 865 ntBASIC10.22□□□□□ -0.77
SMARCA2P51531 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC10.22□□□□□ -0.77
SMARCA2P51531 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC10.22□□□□□ -0.77
SMARCA2P51531 RPL7P6-201ENST00000480903 738 ntBASIC10.22□□□□□ -0.77
SMARCA2P51531 RN7SL447P-201ENST00000494711 245 ntBASIC10.22□□□□□ -0.77
SMARCA2P51531 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC10.22□□□□□ -0.77
SMARCA2P51531 RNU6ATAC24P-201ENST00000516811 135 ntBASIC10.22□□□□□ -0.77
SMARCA2P51531 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC10.22□□□□□ -0.77
SMARCA2P51531 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC10.22□□□□□ -0.77
SMARCA2P51531 FAM25E-202ENST00000608562 189 ntBASIC10.22□□□□□ -0.77
SMARCA2P51531 AC090527.3-201ENST00000619041 548 ntBASIC10.22□□□□□ -0.77
SMARCA2P51531 AP002799.1-201ENST00000623552 423 ntBASIC10.22□□□□□ -0.77
SMARCA2P51531 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC10.22□□□□□ -0.77
SMARCA2P51531 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC10.22□□□□□ -0.77
SMARCA2P51531 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC10.22□□□□□ -0.77
SMARCA2P51531 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SMARCA2P51531 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
SMARCA2P51531 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC10.21□□□□□ -0.77
SMARCA2P51531 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SMARCA2P51531 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SMARCA2P51531 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SMARCA2P51531 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
SMARCA2P51531 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
SMARCA2P51531 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SMARCA2P51531 AC018765.1-201ENST00000623357 3446 ntBASIC10.21□□□□□ -0.78
SMARCA2P51531 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
SMARCA2P51531 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SMARCA2P51531 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SMARCA2P51531 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC10.21□□□□□ -0.78
SMARCA2P51531 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC10.21□□□□□ -0.78
SMARCA2P51531 AL162739.1-201ENST00000450606 307 ntBASIC10.21□□□□□ -0.78
SMARCA2P51531 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC10.21□□□□□ -0.78
SMARCA2P51531 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC10.21□□□□□ -0.78
SMARCA2P51531 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC10.21□□□□□ -0.78
SMARCA2P51531 AC006116.3-201ENST00000592968 361 ntBASIC10.21□□□□□ -0.78
SMARCA2P51531 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SMARCA2P51531 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SMARCA2P51531 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
SMARCA2P51531 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SMARCA2P51531 ABCA11P-202ENST00000504019 2110 ntBASIC10.2□□□□□ -0.78
SMARCA2P51531 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SMARCA2P51531 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms