Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6.32□□□□□ -1.4
LHX1P48742 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LHX1P48742 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.32□□□□□ -1.4
LHX1P48742 AL139099.4-201ENST00000614802 114 ntBASIC6.32□□□□□ -1.4
LHX1P48742 AL162377.2-201ENST00000624532 337 ntBASIC6.32□□□□□ -1.4
LHX1P48742 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.32□□□□□ -1.4
LHX1P48742 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.32□□□□□ -1.4
LHX1P48742 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LHX1P48742 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
LHX1P48742 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LHX1P48742 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.32□□□□□ -1.4
LHX1P48742 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LHX1P48742 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.32□□□□□ -1.4
LHX1P48742 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LHX1P48742 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.32□□□□□ -1.4
LHX1P48742 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LHX1P48742 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LHX1P48742 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.31□□□□□ -1.4
LHX1P48742 ZNF658B-201ENST00000602828 3408 ntBASIC6.31□□□□□ -1.4
LHX1P48742 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
LHX1P48742 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
LHX1P48742 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
LHX1P48742 WDR95P-201ENST00000425638 1542 ntBASIC6.31□□□□□ -1.4
LHX1P48742 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LHX1P48742 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
LHX1P48742 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
LHX1P48742 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.31□□□□□ -1.4
LHX1P48742 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LHX1P48742 OR52B3P-201ENST00000314715 928 ntBASIC6.31□□□□□ -1.4
LHX1P48742 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
LHX1P48742 RPS3AP2-201ENST00000407190 754 ntBASIC6.31□□□□□ -1.4
LHX1P48742 SNORA81-201ENST00000408493 178 ntBASIC6.31□□□□□ -1.4
LHX1P48742 AC244033.1-201ENST00000426826 870 ntBASIC6.31□□□□□ -1.4
LHX1P48742 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.31□□□□□ -1.4
LHX1P48742 AP006222.1-205ENST00000450734 457 ntBASIC6.31□□□□□ -1.4
LHX1P48742 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.31□□□□□ -1.4
LHX1P48742 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.31□□□□□ -1.4
LHX1P48742 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.31□□□□□ -1.4
LHX1P48742 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.31□□□□□ -1.4
LHX1P48742 AC079600.1-201ENST00000550326 297 ntBASIC6.31□□□□□ -1.4
LHX1P48742 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.31□□□□□ -1.4
LHX1P48742 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.31□□□□□ -1.4
LHX1P48742 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.31□□□□□ -1.4
LHX1P48742 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
LHX1P48742 AL445670.1-201ENST00000618889 801 ntBASIC6.31□□□□□ -1.4
LHX1P48742 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.31□□□□□ -1.4
LHX1P48742 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.31□□□□□ -1.4
LHX1P48742 OR8G3P-202ENST00000641572 1255 ntBASIC6.31□□□□□ -1.4
LHX1P48742 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LHX1P48742 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LHX1P48742 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
LHX1P48742 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LHX1P48742 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
LHX1P48742 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LHX1P48742 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
LHX1P48742 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LHX1P48742 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LHX1P48742 AC009135.2-201ENST00000624136 1768 ntBASIC6.31□□□□□ -1.4
LHX1P48742 AC114876.1-201ENST00000490962 1366 ntBASIC6.31□□□□□ -1.4
LHX1P48742 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LHX1P48742 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LHX1P48742 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
LHX1P48742 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
LHX1P48742 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LHX1P48742 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
LHX1P48742 RNA5SP510-201ENST00000364697 99 ntBASIC6.3□□□□□ -1.4
LHX1P48742 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LHX1P48742 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
LHX1P48742 OR7E101P-201ENST00000400428 513 ntBASIC6.3□□□□□ -1.4
LHX1P48742 AL035696.2-201ENST00000407941 709 ntBASIC6.3□□□□□ -1.4
LHX1P48742 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.3□□□□□ -1.4
LHX1P48742 AL389925.1-201ENST00000432257 728 ntBASIC6.3□□□□□ -1.4
LHX1P48742 RPL23AP19-201ENST00000436229 369 ntBASIC6.3□□□□□ -1.4
LHX1P48742 AL512637.1-201ENST00000439523 1231 ntBASIC6.3□□□□□ -1.4
LHX1P48742 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.3□□□□□ -1.4
LHX1P48742 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.3□□□□□ -1.4
LHX1P48742 AL355032.1-201ENST00000472981 438 ntBASIC6.3□□□□□ -1.4
LHX1P48742 PFN1P6-201ENST00000476786 399 ntBASIC6.3□□□□□ -1.4
LHX1P48742 IGKV2-4-201ENST00000523070 340 ntBASIC6.3□□□□□ -1.4
LHX1P48742 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.3□□□□□ -1.4
LHX1P48742 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.3□□□□□ -1.4
LHX1P48742 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.3□□□□□ -1.4
LHX1P48742 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.3□□□□□ -1.4
LHX1P48742 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.3□□□□□ -1.4
LHX1P48742 AC018558.5-201ENST00000565840 952 ntBASIC6.3□□□□□ -1.4
LHX1P48742 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
LHX1P48742 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.3□□□□□ -1.4
LHX1P48742 FAM27E4-201ENST00000605259 342 ntBASIC6.3□□□□□ -1.4
LHX1P48742 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.3□□□□□ -1.4
LHX1P48742 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LHX1P48742 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.3□□□□□ -1.4
LHX1P48742 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.3□□□□□ -1.4
LHX1P48742 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.3□□□□□ -1.4
LHX1P48742 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LHX1P48742 WBP11P1-201ENST00000562560 1931 ntBASIC6.3□□□□□ -1.4
LHX1P48742 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.3□□□□□ -1.4
LHX1P48742 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LHX1P48742 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LHX1P48742 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
LHX1P48742 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms