Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXA9P31269 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXA9P31269 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
HOXA9P31269 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA9P31269 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA9P31269 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA9P31269 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA9P31269 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA9P31269 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA9P31269 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA9P31269 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXA9P31269 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HOXA9P31269 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HOXA9P31269 GTF3AP1-201ENST00000416942 1004 ntBASIC6.26□□□□□ -1.41
HOXA9P31269 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA9P31269 AC127526.2-201ENST00000426436 775 ntBASIC6.26□□□□□ -1.41
HOXA9P31269 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HOXA9P31269 RPS7P3-201ENST00000443360 580 ntBASIC6.26□□□□□ -1.41
HOXA9P31269 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA9P31269 MYO5BP2-201ENST00000449815 1277 ntBASIC6.26□□□□□ -1.41
HOXA9P31269 AC073594.1-201ENST00000462065 364 ntBASIC6.26□□□□□ -1.41
HOXA9P31269 RN7SL466P-201ENST00000497546 295 ntBASIC6.26□□□□□ -1.41
HOXA9P31269 AC008629.2-201ENST00000503783 483 ntBASIC6.26□□□□□ -1.41
HOXA9P31269 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXA9P31269 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.26□□□□□ -1.41
HOXA9P31269 AP005639.1-201ENST00000526939 192 ntBASIC6.26□□□□□ -1.41
HOXA9P31269 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXA9P31269 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA9P31269 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA9P31269 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXA9P31269 AC091193.1-201ENST00000604640 448 ntBASIC6.26□□□□□ -1.41
HOXA9P31269 AC104695.2-201ENST00000605056 775 ntBASIC6.26□□□□□ -1.41
HOXA9P31269 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA9P31269 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA9P31269 AL691477.1-201ENST00000624398 162 ntBASIC6.26□□□□□ -1.41
HOXA9P31269 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA9P31269 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
HOXA9P31269 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA9P31269 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
HOXA9P31269 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
HOXA9P31269 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA9P31269 CCAT2-201ENST00000630920 1752 ntBASIC6.26□□□□□ -1.41
HOXA9P31269 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA9P31269 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA9P31269 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA9P31269 AC027279.4-201ENST00000624371 2072 ntBASIC6.26□□□□□ -1.41
HOXA9P31269 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA9P31269 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXA9P31269 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HOXA9P31269 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA9P31269 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
HOXA9P31269 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXA9P31269 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
HOXA9P31269 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXA9P31269 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXA9P31269 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
HOXA9P31269 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXA9P31269 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA9P31269 SNORA64.1-201ENST00000362600 132 ntBASIC6.25□□□□□ -1.41
HOXA9P31269 AL451142.1-201ENST00000375867 775 ntBASIC6.25□□□□□ -1.41
HOXA9P31269 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXA9P31269 OR2AT2P-201ENST00000413438 905 ntBASIC6.25□□□□□ -1.41
HOXA9P31269 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HOXA9P31269 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXA9P31269 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXA9P31269 LRRC37A14P-201ENST00000452297 462 ntBASIC6.25□□□□□ -1.41
HOXA9P31269 RAB28P2-201ENST00000454299 641 ntBASIC6.25□□□□□ -1.41
HOXA9P31269 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA9P31269 RN7SL284P-201ENST00000498823 275 ntBASIC6.25□□□□□ -1.41
HOXA9P31269 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXA9P31269 AC074087.1-201ENST00000512059 724 ntBASIC6.25□□□□□ -1.41
HOXA9P31269 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA9P31269 OR4A42P-201ENST00000531397 938 ntBASIC6.25□□□□□ -1.41
HOXA9P31269 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXA9P31269 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXA9P31269 IGBP1P1-201ENST00000554337 1009 ntBASIC6.25□□□□□ -1.41
HOXA9P31269 AC015802.2-201ENST00000589690 189 ntBASIC6.25□□□□□ -1.41
HOXA9P31269 RN7SL544P-201ENST00000617232 284 ntBASIC6.25□□□□□ -1.41
HOXA9P31269 RN7SL763P-201ENST00000620922 284 ntBASIC6.25□□□□□ -1.41
HOXA9P31269 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
HOXA9P31269 AC119674.1-213ENST00000641177 1386 ntBASIC6.25□□□□□ -1.41
HOXA9P31269 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXA9P31269 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXA9P31269 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.25□□□□□ -1.41
HOXA9P31269 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HOXA9P31269 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXA9P31269 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA9P31269 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA9P31269 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA9P31269 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA9P31269 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA9P31269 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXA9P31269 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXA9P31269 AC011815.2-201ENST00000618230 2021 ntBASIC6.25□□□□□ -1.41
HOXA9P31269 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
HOXA9P31269 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXA9P31269 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXA9P31269 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA9P31269 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA9P31269 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms