Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RNA5SP110-201ENST00000362638 115 ntBASIC6.63□□□□□ -1.35
BDNFP23560 RNU6-618P-201ENST00000363518 112 ntBASIC6.63□□□□□ -1.35
BDNFP23560 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
BDNFP23560 MIR7-1-201ENST00000384871 110 ntBASIC6.63□□□□□ -1.35
BDNFP23560 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
BDNFP23560 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.63□□□□□ -1.35
BDNFP23560 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
BDNFP23560 RNU4-64P-201ENST00000410795 131 ntBASIC6.63□□□□□ -1.35
BDNFP23560 RN7SKP144-201ENST00000411108 279 ntBASIC6.63□□□□□ -1.35
BDNFP23560 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.63□□□□□ -1.35
BDNFP23560 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.63□□□□□ -1.35
BDNFP23560 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.63□□□□□ -1.35
BDNFP23560 OR51A6P-201ENST00000418680 1004 ntBASIC6.63□□□□□ -1.35
BDNFP23560 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.63□□□□□ -1.35
BDNFP23560 IGLV3-4-201ENST00000432300 244 ntBASIC6.63□□□□□ -1.35
BDNFP23560 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.63□□□□□ -1.35
BDNFP23560 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.63□□□□□ -1.35
BDNFP23560 MORF4-201ENST00000447135 971 ntBASIC6.63□□□□□ -1.35
BDNFP23560 AC092967.1-201ENST00000449016 481 ntBASIC6.63□□□□□ -1.35
BDNFP23560 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
BDNFP23560 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.63□□□□□ -1.35
BDNFP23560 SNX18P26-201ENST00000458433 740 ntBASIC6.63□□□□□ -1.35
BDNFP23560 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
BDNFP23560 AC104966.1-201ENST00000467010 1464 ntBASIC6.63□□□□□ -1.35
BDNFP23560 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
BDNFP23560 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
BDNFP23560 OR7E99P-201ENST00000505750 922 ntBASIC6.63□□□□□ -1.35
BDNFP23560 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
BDNFP23560 TOMM20P1-201ENST00000534518 427 ntBASIC6.63□□□□□ -1.35
BDNFP23560 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.63□□□□□ -1.35
BDNFP23560 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.63□□□□□ -1.35
BDNFP23560 AL353796.1-201ENST00000561542 3241 ntBASIC6.63□□□□□ -1.35
BDNFP23560 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
BDNFP23560 MIR4701-201ENST00000583094 63 ntBASIC6.63□□□□□ -1.35
BDNFP23560 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.63□□□□□ -1.35
BDNFP23560 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.63□□□□□ -1.35
BDNFP23560 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
BDNFP23560 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.63□□□□□ -1.35
BDNFP23560 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
BDNFP23560 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.63□□□□□ -1.35
BDNFP23560 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.63□□□□□ -1.35
BDNFP23560 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BDNFP23560 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
BDNFP23560 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
BDNFP23560 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.62□□□□□ -1.35
BDNFP23560 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
BDNFP23560 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
BDNFP23560 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.62□□□□□ -1.35
BDNFP23560 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
BDNFP23560 AC110792.3-201ENST00000595906 1614 ntBASIC6.62□□□□□ -1.35
BDNFP23560 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
BDNFP23560 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
BDNFP23560 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
BDNFP23560 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
BDNFP23560 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
BDNFP23560 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
BDNFP23560 RNU6-670P-201ENST00000364312 104 ntBASIC6.62□□□□□ -1.35
BDNFP23560 ST13P16-201ENST00000401760 781 ntBASIC6.62□□□□□ -1.35
BDNFP23560 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.62□□□□□ -1.35
BDNFP23560 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.62□□□□□ -1.35
BDNFP23560 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.62□□□□□ -1.35
BDNFP23560 AC115283.1-201ENST00000427353 400 ntBASIC6.62□□□□□ -1.35
BDNFP23560 AC002069.1-201ENST00000429649 1159 ntBASIC6.62□□□□□ -1.35
BDNFP23560 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.62□□□□□ -1.35
BDNFP23560 AMYP1-201ENST00000440059 1023 ntBASIC6.62□□□□□ -1.35
BDNFP23560 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.62□□□□□ -1.35
BDNFP23560 RPL5P10-201ENST00000445207 894 ntBASIC6.62□□□□□ -1.35
BDNFP23560 RN7SKP35-201ENST00000517210 151 ntBASIC6.62□□□□□ -1.35
BDNFP23560 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.62□□□□□ -1.35
BDNFP23560 AC009268.1-201ENST00000561352 1203 ntBASIC6.62□□□□□ -1.35
BDNFP23560 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.62□□□□□ -1.35
BDNFP23560 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.62□□□□□ -1.35
BDNFP23560 AC233702.7-202ENST00000582941 211 ntBASIC6.62□□□□□ -1.35
BDNFP23560 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.62□□□□□ -1.35
BDNFP23560 DYNLL1P1-201ENST00000595442 269 ntBASIC6.62□□□□□ -1.35
BDNFP23560 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.62□□□□□ -1.35
BDNFP23560 AC006924.1-201ENST00000610750 559 ntBASIC6.62□□□□□ -1.35
BDNFP23560 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
BDNFP23560 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.62□□□□□ -1.35
BDNFP23560 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
BDNFP23560 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
BDNFP23560 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.62□□□□□ -1.35
BDNFP23560 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
BDNFP23560 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.62□□□□□ -1.35
BDNFP23560 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
BDNFP23560 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
BDNFP23560 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
BDNFP23560 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.62□□□□□ -1.35
BDNFP23560 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
BDNFP23560 AC007342.7-201ENST00000624610 2337 ntBASIC6.61□□□□□ -1.35
BDNFP23560 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BDNFP23560 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
BDNFP23560 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.61□□□□□ -1.35
BDNFP23560 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.61□□□□□ -1.35
BDNFP23560 AL117378.2-201ENST00000622916 1337 ntBASIC6.61□□□□□ -1.35
BDNFP23560 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
BDNFP23560 MFSD8-219ENST00000641228 2559 ntBASIC6.61□□□□□ -1.35
BDNFP23560 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
BDNFP23560 STAG3L4-201ENST00000352103 530 ntBASIC6.61□□□□□ -1.35
BDNFP23560 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms