Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 MIR4271-201ENST00000582451 67 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AL645933.2-201ENST00000606743 1207 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AC096861.1-201ENST00000616652 240 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AL512652.1-201ENST00000619006 500 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AC005225.5-201ENST00000623547 2225 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AC073593.1-201ENST00000624500 411 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 RNU1-59P-201ENST00000364829 162 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 MIR621-201ENST00000384919 96 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 RPL12P43-201ENST00000420608 499 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 ZNF619P1-201ENST00000446539 752 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 FTLP8-201ENST00000446770 267 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 DEFB109A-201ENST00000482450 265 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 AC124945.1-201ENST00000485133 188 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 RN7SL170P-201ENST00000487098 295 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 RPL37P23-201ENST00000492641 294 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 OR7E99P-201ENST00000505750 922 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 AC113398.2-201ENST00000507630 558 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 LDHAP1-201ENST00000509421 992 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 AC011853.1-201ENST00000518911 454 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 AC007346.1-201ENST00000569208 867 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 MIR4502-201ENST00000580432 81 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 AC092681.3-201ENST00000609463 678 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 U1.25-201ENST00000614085 162 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 U1.31-201ENST00000620022 160 ntBASIC6.11□□□□□ -1.43
HLA-DPA1P20036 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DPA1P20036 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 MTCO1P28-201ENST00000574177 1528 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AC005261.6-201ENST00000623072 1387 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AP002512.4-202ENST00000641599 4530 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 OR10R3P-201ENST00000361688 942 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 RPL7P58-201ENST00000402913 758 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AL096800.1-201ENST00000405326 893 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 MYL6P5-201ENST00000412707 459 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 SNRPFP2-201ENST00000440710 251 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms