Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC6.43□□□□□ -1.38
ATF4P18848 MTCO3P30-201ENST00000426425 670 ntBASIC6.43□□□□□ -1.38
ATF4P18848 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC6.43□□□□□ -1.38
ATF4P18848 AC124944.2-201ENST00000429866 1242 ntBASIC6.43□□□□□ -1.38
ATF4P18848 RPL26P34-201ENST00000431005 451 ntBASIC6.43□□□□□ -1.38
ATF4P18848 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC6.43□□□□□ -1.38
ATF4P18848 RPS28P8-201ENST00000435020 208 ntBASIC6.43□□□□□ -1.38
ATF4P18848 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.43□□□□□ -1.38
ATF4P18848 MTND1P34-201ENST00000438556 671 ntBASIC6.43□□□□□ -1.38
ATF4P18848 ST13P2-201ENST00000438916 1109 ntBASIC6.43□□□□□ -1.38
ATF4P18848 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.43□□□□□ -1.38
ATF4P18848 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC6.43□□□□□ -1.38
ATF4P18848 AC242426.2-201ENST00000446956 795 ntBASIC6.43□□□□□ -1.38
ATF4P18848 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ATF4P18848 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.43□□□□□ -1.38
ATF4P18848 AL392003.2-201ENST00000451015 679 ntBASIC6.43□□□□□ -1.38
ATF4P18848 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC6.43□□□□□ -1.38
ATF4P18848 NF1P3-201ENST00000457709 450 ntBASIC6.43□□□□□ -1.38
ATF4P18848 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATF4P18848 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC6.43□□□□□ -1.38
ATF4P18848 IGKV1-16-201ENST00000479981 378 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
ATF4P18848 TUBB3P2-201ENST00000480063 232 ntBASIC6.43□□□□□ -1.38
ATF4P18848 LINC02160-201ENST00000503577 517 ntTSL 3 BASIC6.43□□□□□ -1.38
ATF4P18848 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC6.43□□□□□ -1.38
ATF4P18848 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
ATF4P18848 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.43□□□□□ -1.38
ATF4P18848 AC106800.2-201ENST00000514009 1103 ntBASIC6.43□□□□□ -1.38
ATF4P18848 MTCO2P32-201ENST00000514865 403 ntBASIC6.43□□□□□ -1.38
ATF4P18848 RNU6-1261P-201ENST00000517194 104 ntBASIC6.43□□□□□ -1.38
ATF4P18848 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.43□□□□□ -1.38
ATF4P18848 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC6.43□□□□□ -1.38
ATF4P18848 AF279873.1-201ENST00000523393 313 ntBASIC6.43□□□□□ -1.38
ATF4P18848 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.43□□□□□ -1.38
ATF4P18848 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
ATF4P18848 LINC00681-201ENST00000530150 504 ntTSL 2 BASIC6.43□□□□□ -1.38
ATF4P18848 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ATF4P18848 AC018448.2-201ENST00000548295 305 ntBASIC6.43□□□□□ -1.38
ATF4P18848 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC6.43□□□□□ -1.38
ATF4P18848 AL391156.1-201ENST00000554965 554 ntBASIC6.43□□□□□ -1.38
ATF4P18848 AC068714.1-201ENST00000559623 800 ntBASIC6.43□□□□□ -1.38
ATF4P18848 AL512347.1-201ENST00000566420 503 ntBASIC6.43□□□□□ -1.38
ATF4P18848 AC012186.1-201ENST00000566702 398 ntBASIC6.43□□□□□ -1.38
ATF4P18848 LINC01834-201ENST00000567374 385 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ATF4P18848 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC6.43□□□□□ -1.38
ATF4P18848 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC6.43□□□□□ -1.38
ATF4P18848 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.43□□□□□ -1.38
ATF4P18848 AL358335.3-201ENST00000604678 327 ntBASIC6.43□□□□□ -1.38
ATF4P18848 LINC02018-202ENST00000608707 445 ntTSL 3 BASIC6.43□□□□□ -1.38
ATF4P18848 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.43□□□□□ -1.38
ATF4P18848 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.43□□□□□ -1.38
ATF4P18848 AC243654.2-201ENST00000612843 443 ntBASIC6.43□□□□□ -1.38
ATF4P18848 AC026951.2-201ENST00000613847 241 ntBASIC6.43□□□□□ -1.38
ATF4P18848 AC243756.2-201ENST00000618406 463 ntBASIC6.43□□□□□ -1.38
ATF4P18848 AC074029.3-201ENST00000618623 312 ntBASIC6.43□□□□□ -1.38
ATF4P18848 AC068792.1-201ENST00000621354 417 ntBASIC6.43□□□□□ -1.38
ATF4P18848 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC6.43□□□□□ -1.38
ATF4P18848 AC005753.1-201ENST00000623837 618 ntBASIC6.43□□□□□ -1.38
ATF4P18848 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ATF4P18848 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATF4P18848 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATF4P18848 FBXW7-207ENST00000603841 2261 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATF4P18848 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ATF4P18848 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
ATF4P18848 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.43□□□□□ -1.38
ATF4P18848 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATF4P18848 AC007159.1-201ENST00000566529 4706 ntBASIC6.43□□□□□ -1.38
ATF4P18848 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATF4P18848 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC6.43□□□□□ -1.38
ATF4P18848 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATF4P18848 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.43□□□□□ -1.38
ATF4P18848 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATF4P18848 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATF4P18848 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.43□□□□□ -1.38
ATF4P18848 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATF4P18848 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC6.43□□□□□ -1.38
ATF4P18848 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATF4P18848 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATF4P18848 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATF4P18848 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATF4P18848 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATF4P18848 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATF4P18848 SAMMSON-222ENST00000641901 2727 ntBASIC6.42□□□□□ -1.38
ATF4P18848 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATF4P18848 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.42□□□□□ -1.38
ATF4P18848 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATF4P18848 TMEM136-204ENST00000529187 3930 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATF4P18848 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATF4P18848 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
ATF4P18848 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATF4P18848 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATF4P18848 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
ATF4P18848 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATF4P18848 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC6.42□□□□□ -1.38
ATF4P18848 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATF4P18848 OR9K2-201ENST00000305377 1122 ntBASIC6.42□□□□□ -1.38
ATF4P18848 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATF4P18848 AL672167.1-206ENST00000356293 943 ntBASIC6.42□□□□□ -1.38
ATF4P18848 Y_RNA.25-201ENST00000362528 102 ntBASIC6.42□□□□□ -1.38
ATF4P18848 RN7SKP204-201ENST00000365481 310 ntBASIC6.42□□□□□ -1.38
ATF4P18848 VDAC2P1-201ENST00000399358 958 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms