Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC135983.3-201ENST00000528049 1226 ntBASIC6.9□□□□□ -1.3
PTPN1P18031 OR52K3P-201ENST00000531655 943 ntBASIC6.9□□□□□ -1.3
PTPN1P18031 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
PTPN1P18031 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.9□□□□□ -1.3
PTPN1P18031 OR4U1P-201ENST00000554958 912 ntBASIC6.9□□□□□ -1.3
PTPN1P18031 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.9□□□□□ -1.3
PTPN1P18031 AC023968.1-201ENST00000560719 475 ntBASIC6.9□□□□□ -1.3
PTPN1P18031 MT1CP-201ENST00000567054 174 ntBASIC6.9□□□□□ -1.3
PTPN1P18031 AC145350.1-201ENST00000567426 208 ntBASIC6.9□□□□□ -1.3
PTPN1P18031 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.9□□□□□ -1.3
PTPN1P18031 MIR5095-201ENST00000578844 88 ntBASIC6.9□□□□□ -1.3
PTPN1P18031 SETP3-201ENST00000581726 813 ntBASIC6.9□□□□□ -1.3
PTPN1P18031 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.9□□□□□ -1.3
PTPN1P18031 AC025165.5-201ENST00000602802 578 ntBASIC6.9□□□□□ -1.3
PTPN1P18031 RNU4-5P-201ENST00000607255 135 ntBASIC6.9□□□□□ -1.3
PTPN1P18031 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.9□□□□□ -1.3
PTPN1P18031 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.9□□□□□ -1.3
PTPN1P18031 AC011330.2-201ENST00000621680 635 ntBASIC6.9□□□□□ -1.3
PTPN1P18031 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.9□□□□□ -1.3
PTPN1P18031 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.9□□□□□ -1.3
PTPN1P18031 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.9□□□□□ -1.3
PTPN1P18031 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PTPN1P18031 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PTPN1P18031 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.9□□□□□ -1.3
PTPN1P18031 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.9□□□□□ -1.31
PTPN1P18031 MFSD8-220ENST00000641243 1422 ntBASIC6.9□□□□□ -1.31
PTPN1P18031 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.9□□□□□ -1.31
PTPN1P18031 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PTPN1P18031 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
PTPN1P18031 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.9□□□□□ -1.31
PTPN1P18031 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PTPN1P18031 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PTPN1P18031 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PTPN1P18031 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PTPN1P18031 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
PTPN1P18031 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.89□□□□□ -1.31
PTPN1P18031 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN1P18031 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN1P18031 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN1P18031 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN1P18031 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
PTPN1P18031 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
PTPN1P18031 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN1P18031 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN1P18031 SNORD35A-201ENST00000363389 86 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 AL391419.1-201ENST00000398901 1275 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 HMGB3P19-201ENST00000403971 560 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN1P18031 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.89□□□□□ -1.31
PTPN1P18031 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.89□□□□□ -1.31
PTPN1P18031 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.89□□□□□ -1.31
PTPN1P18031 RPL23AP18-201ENST00000416139 468 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.89□□□□□ -1.31
PTPN1P18031 ZNF885P-201ENST00000420174 1098 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 CYCSP52-201ENST00000422857 310 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.89□□□□□ -1.31
PTPN1P18031 AL606490.7-201ENST00000433136 191 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 AC003989.1-201ENST00000434569 565 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 SOCS5P1-201ENST00000440415 949 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 MTCO1P53-201ENST00000441633 699 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.89□□□□□ -1.31
PTPN1P18031 HMGB1P26-201ENST00000452520 628 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 RARRES2P3-201ENST00000457739 473 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 RN7SL39P-201ENST00000462264 297 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.89□□□□□ -1.31
PTPN1P18031 AC090589.1-201ENST00000473109 362 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.89□□□□□ -1.31
PTPN1P18031 AL117692.1-201ENST00000494283 713 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 AC022206.1-201ENST00000495947 347 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 AC023818.1-201ENST00000498379 384 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 SNORA58-201ENST00000505219 137 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN1P18031 AC117522.2-201ENST00000510049 657 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 SNX18P25-201ENST00000510539 758 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 MTCO3P28-201ENST00000513351 515 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.89□□□□□ -1.31
PTPN1P18031 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC6.89□□□□□ -1.31
PTPN1P18031 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.89□□□□□ -1.31
PTPN1P18031 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.89□□□□□ -1.31
PTPN1P18031 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.89□□□□□ -1.31
PTPN1P18031 MTCYBP23-201ENST00000558717 1102 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.89□□□□□ -1.31
PTPN1P18031 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.89□□□□□ -1.31
PTPN1P18031 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.89□□□□□ -1.31
PTPN1P18031 GAS5-AS1-201ENST00000602767 694 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 AC113368.1-201ENST00000603736 382 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN1P18031 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 MRPL57P1-201ENST00000621486 265 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 FRG1DP-201ENST00000635586 771 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.89□□□□□ -1.31
PTPN1P18031 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.89□□□□□ -1.31
PTPN1P18031 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN1P18031 AL669831.5-218ENST00000591702 1873 ntBASIC6.89□□□□□ -1.31
PTPN1P18031 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN1P18031 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN1P18031 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN1P18031 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms