Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.67□□□□□ -1.34
COL6A2P12110 CR382285.2-201ENST00000624662 1495 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
COL6A2P12110 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
COL6A2P12110 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
COL6A2P12110 OR10D1P-201ENST00000355343 936 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.67□□□□□ -1.34
COL6A2P12110 AL603865.2-201ENST00000401679 213 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 RPSAP44-201ENST00000406712 884 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
COL6A2P12110 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.67□□□□□ -1.34
COL6A2P12110 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC6.67□□□□□ -1.34
COL6A2P12110 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.67□□□□□ -1.34
COL6A2P12110 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.67□□□□□ -1.34
COL6A2P12110 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.67□□□□□ -1.34
COL6A2P12110 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.67□□□□□ -1.34
COL6A2P12110 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.67□□□□□ -1.34
COL6A2P12110 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 AL139415.1-201ENST00000424862 352 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.67□□□□□ -1.34
COL6A2P12110 AC073143.1-201ENST00000436316 395 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC6.67□□□□□ -1.34
COL6A2P12110 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.67□□□□□ -1.34
COL6A2P12110 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC6.67□□□□□ -1.34
COL6A2P12110 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.67□□□□□ -1.34
COL6A2P12110 MTND2P28-201ENST00000457540 1044 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 RPS26P11-201ENST00000463445 348 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 RPS26P6-201ENST00000475156 348 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 AC018475.1-201ENST00000478358 465 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 AC017007.1-201ENST00000511960 415 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.67□□□□□ -1.34
COL6A2P12110 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.67□□□□□ -1.34
COL6A2P12110 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC6.67□□□□□ -1.34
COL6A2P12110 IGLV3-6-201ENST00000523937 250 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.67□□□□□ -1.34
COL6A2P12110 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.67□□□□□ -1.34
COL6A2P12110 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.67□□□□□ -1.34
COL6A2P12110 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.67□□□□□ -1.34
COL6A2P12110 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.67□□□□□ -1.34
COL6A2P12110 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.67□□□□□ -1.34
COL6A2P12110 CCDC58P1-201ENST00000578567 430 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 AP005136.2-201ENST00000583253 1049 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.67□□□□□ -1.34
COL6A2P12110 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.67□□□□□ -1.34
COL6A2P12110 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.67□□□□□ -1.34
COL6A2P12110 RMST_10.1-201ENST00000616309 154 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC6.67□□□□□ -1.34
COL6A2P12110 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC6.67□□□□□ -1.34
COL6A2P12110 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.67□□□□□ -1.34
COL6A2P12110 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.67□□□□□ -1.34
COL6A2P12110 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.67□□□□□ -1.34
COL6A2P12110 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.67□□□□□ -1.34
COL6A2P12110 DLEU2L-201ENST00000371086 3555 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.67□□□□□ -1.34
COL6A2P12110 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.67□□□□□ -1.34
COL6A2P12110 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 SAMM50P1-201ENST00000455403 1399 ntBASIC6.67□□□□□ -1.34
COL6A2P12110 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.67□□□□□ -1.34
COL6A2P12110 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
COL6A2P12110 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL6A2P12110 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
COL6A2P12110 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.66□□□□□ -1.34
COL6A2P12110 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 AC017079.1-201ENST00000333650 415 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 RNU6-1005P-201ENST00000384519 107 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 RNU6-636P-201ENST00000384598 107 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 RNA5SP280-201ENST00000411230 115 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.66□□□□□ -1.34
COL6A2P12110 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.66□□□□□ -1.34
COL6A2P12110 AC016907.1-201ENST00000419483 435 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 GAPDHP57-201ENST00000424400 585 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 RPP40P1-201ENST00000426762 456 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms