Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.52□□□□□ -1.37
RB1P06400 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.52□□□□□ -1.37
RB1P06400 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RB1P06400 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RB1P06400 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RB1P06400 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.52□□□□□ -1.37
RB1P06400 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RB1P06400 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.51□□□□□ -1.37
RB1P06400 AC016251.2-201ENST00000623393 3089 ntBASIC6.51□□□□□ -1.37
RB1P06400 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
RB1P06400 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RB1P06400 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RB1P06400 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.51□□□□□ -1.37
RB1P06400 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.51□□□□□ -1.37
RB1P06400 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.51□□□□□ -1.37
RB1P06400 RN7SKP128-201ENST00000364270 303 ntBASIC6.51□□□□□ -1.37
RB1P06400 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RB1P06400 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.51□□□□□ -1.37
RB1P06400 AL445238.1-204ENST00000400311 463 ntBASIC6.51□□□□□ -1.37
RB1P06400 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RB1P06400 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.51□□□□□ -1.37
RB1P06400 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.51□□□□□ -1.37
RB1P06400 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.51□□□□□ -1.37
RB1P06400 AL451063.1-201ENST00000450164 1133 ntBASIC6.51□□□□□ -1.37
RB1P06400 RN7SL269P-201ENST00000467795 305 ntBASIC6.51□□□□□ -1.37
RB1P06400 COX6B1P2-201ENST00000489624 230 ntBASIC6.51□□□□□ -1.37
RB1P06400 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.51□□□□□ -1.37
RB1P06400 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RB1P06400 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.51□□□□□ -1.37
RB1P06400 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.51□□□□□ -1.37
RB1P06400 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.51□□□□□ -1.37
RB1P06400 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.51□□□□□ -1.37
RB1P06400 FO393422.1-201ENST00000603908 708 ntBASIC6.51□□□□□ -1.37
RB1P06400 AC139493.1-201ENST00000604368 397 ntBASIC6.51□□□□□ -1.37
RB1P06400 AL713998.2-201ENST00000604538 1198 ntBASIC6.51□□□□□ -1.37
RB1P06400 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.51□□□□□ -1.37
RB1P06400 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.51□□□□□ -1.37
RB1P06400 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
RB1P06400 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RB1P06400 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
RB1P06400 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RB1P06400 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RB1P06400 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
RB1P06400 AC027279.4-201ENST00000624371 2072 ntBASIC6.51□□□□□ -1.37
RB1P06400 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
RB1P06400 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RB1P06400 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.51□□□□□ -1.37
RB1P06400 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.51□□□□□ -1.37
RB1P06400 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.5□□□□□ -1.37
RB1P06400 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.5□□□□□ -1.37
RB1P06400 ZNF402P-201ENST00000404435 3100 ntBASIC6.5□□□□□ -1.37
RB1P06400 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RB1P06400 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RB1P06400 GUCY1B2-204ENST00000531898 1979 ntBASIC6.5□□□□□ -1.37
RB1P06400 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.5□□□□□ -1.37
RB1P06400 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RB1P06400 OR9K1P-201ENST00000326513 941 ntBASIC6.5□□□□□ -1.37
RB1P06400 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.5□□□□□ -1.37
RB1P06400 AC016739.1-201ENST00000405359 345 ntBASIC6.5□□□□□ -1.37
RB1P06400 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.5□□□□□ -1.37
RB1P06400 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.5□□□□□ -1.37
RB1P06400 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.5□□□□□ -1.37
RB1P06400 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.5□□□□□ -1.37
RB1P06400 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RB1P06400 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.5□□□□□ -1.37
RB1P06400 AC023245.1-201ENST00000468501 517 ntBASIC6.5□□□□□ -1.37
RB1P06400 AC074087.1-201ENST00000512059 724 ntBASIC6.5□□□□□ -1.37
RB1P06400 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.5□□□□□ -1.37
RB1P06400 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.5□□□□□ -1.37
RB1P06400 AC027667.1-201ENST00000545814 304 ntBASIC6.5□□□□□ -1.37
RB1P06400 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RB1P06400 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.5□□□□□ -1.37
RB1P06400 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.5□□□□□ -1.37
RB1P06400 MIR4505-201ENST00000582238 73 ntBASIC6.5□□□□□ -1.37
RB1P06400 AC107993.1-201ENST00000591343 684 ntBASIC6.5□□□□□ -1.37
RB1P06400 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RB1P06400 BNIP3P32-201ENST00000600015 554 ntBASIC6.5□□□□□ -1.37
RB1P06400 AC005229.3-201ENST00000603438 323 ntBASIC6.5□□□□□ -1.37
RB1P06400 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.5□□□□□ -1.37
RB1P06400 AL021707.7-201ENST00000607991 416 ntBASIC6.5□□□□□ -1.37
RB1P06400 AC107905.1-201ENST00000616204 426 ntBASIC6.5□□□□□ -1.37
RB1P06400 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.5□□□□□ -1.37
RB1P06400 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RB1P06400 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RB1P06400 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RB1P06400 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RB1P06400 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RB1P06400 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RB1P06400 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.49□□□□□ -1.37
RB1P06400 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RB1P06400 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
RB1P06400 BRD7P6-201ENST00000431406 1860 ntBASIC6.49□□□□□ -1.37
RB1P06400 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RB1P06400 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.49□□□□□ -1.37
RB1P06400 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
RB1P06400 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RB1P06400 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
RB1P06400 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RB1P06400 RNU105B-201ENST00000364478 208 ntBASIC6.49□□□□□ -1.37
RB1P06400 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms