Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RN7SKP29-201ENST00000410957 272 ntBASIC5.93□□□□□ -1.46
HLA-DQB2P05538 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 RPL34P27-201ENST00000428810 349 ntBASIC5.93□□□□□ -1.46
HLA-DQB2P05538 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 DEFA9P-201ENST00000433042 285 ntBASIC5.93□□□□□ -1.46
HLA-DQB2P05538 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 DNAJA1P5-201ENST00000440278 943 ntBASIC5.93□□□□□ -1.46
HLA-DQB2P05538 RSU1P1-201ENST00000453416 441 ntBASIC5.93□□□□□ -1.46
HLA-DQB2P05538 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 FRG2FP-204ENST00000453982 852 ntBASIC5.93□□□□□ -1.46
HLA-DQB2P05538 HLA-DPA3-207ENST00000454398 229 ntBASIC5.93□□□□□ -1.46
HLA-DQB2P05538 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 TRIM77BP-201ENST00000524985 1119 ntBASIC5.93□□□□□ -1.46
HLA-DQB2P05538 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 FO681491.1-202ENST00000623392 737 ntBASIC5.93□□□□□ -1.46
HLA-DQB2P05538 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 MFSD8-239ENST00000641590 2479 ntBASIC5.93□□□□□ -1.46
HLA-DQB2P05538 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 PDZK1P1-202ENST00000425209 1350 ntBASIC5.93□□□□□ -1.46
HLA-DQB2P05538 AP004607.3-201ENST00000530354 3915 ntBASIC5.93□□□□□ -1.46
HLA-DQB2P05538 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 OR2W4P-201ENST00000406496 926 ntBASIC5.92□□□□□ -1.46
HLA-DQB2P05538 MRPL53P1-201ENST00000414323 319 ntBASIC5.92□□□□□ -1.46
HLA-DQB2P05538 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 GAPDHP71-201ENST00000511530 1003 ntBASIC5.92□□□□□ -1.46
HLA-DQB2P05538 AC060775.1-201ENST00000518241 520 ntBASIC5.92□□□□□ -1.46
HLA-DQB2P05538 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 AL121594.2-201ENST00000541658 472 ntBASIC5.92□□□□□ -1.46
HLA-DQB2P05538 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 AP001267.4-201ENST00000602598 545 ntBASIC5.92□□□□□ -1.46
HLA-DQB2P05538 RPL12P48-201ENST00000605620 304 ntBASIC5.92□□□□□ -1.46
HLA-DQB2P05538 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQB2P05538 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 MIR1203-201ENST00000408812 85 ntBASIC5.91□□□□□ -1.46
HLA-DQB2P05538 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 AC126120.1-201ENST00000431082 470 ntBASIC5.91□□□□□ -1.46
HLA-DQB2P05538 GAPDHP48-201ENST00000436626 961 ntBASIC5.91□□□□□ -1.46
HLA-DQB2P05538 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 KRT8P51-201ENST00000438938 274 ntBASIC5.91□□□□□ -1.46
HLA-DQB2P05538 RPL12P39-201ENST00000455456 496 ntBASIC5.91□□□□□ -1.46
HLA-DQB2P05538 RNU1-88P-201ENST00000459274 128 ntBASIC5.91□□□□□ -1.46
HLA-DQB2P05538 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 AC006499.4-201ENST00000510947 694 ntBASIC5.91□□□□□ -1.46
HLA-DQB2P05538 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms