Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC3.48□□□□□ -1.85
APOBP04114 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC3.48□□□□□ -1.85
APOBP04114 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC3.48□□□□□ -1.85
APOBP04114 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC3.48□□□□□ -1.85
APOBP04114 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC3.48□□□□□ -1.85
APOBP04114 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.48□□□□□ -1.85
APOBP04114 TRY2P-201ENST00000448860 689 ntBASIC3.48□□□□□ -1.85
APOBP04114 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.48□□□□□ -1.85
APOBP04114 AP000919.1-201ENST00000582850 985 ntBASIC3.48□□□□□ -1.85
APOBP04114 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC3.48□□□□□ -1.85
APOBP04114 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
APOBP04114 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 USP9YP3-201ENST00000434481 1766 ntBASIC3.48□□□□□ -1.85
APOBP04114 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
APOBP04114 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 GLULP6-201ENST00000399502 913 ntBASIC3.48□□□□□ -1.85
APOBP04114 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC3.48□□□□□ -1.85
APOBP04114 AC245028.1-201ENST00000423259 256 ntBASIC3.48□□□□□ -1.85
APOBP04114 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.48□□□□□ -1.85
APOBP04114 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 Z92846.1-201ENST00000456203 268 ntBASIC3.48□□□□□ -1.85
APOBP04114 CCDC11P1-201ENST00000503137 1162 ntBASIC3.48□□□□□ -1.85
APOBP04114 AC105384.2-201ENST00000508433 640 ntBASIC3.48□□□□□ -1.85
APOBP04114 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
APOBP04114 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC3.48□□□□□ -1.85
APOBP04114 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC3.48□□□□□ -1.85
APOBP04114 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 AC114876.1-201ENST00000490962 1366 ntBASIC3.48□□□□□ -1.85
APOBP04114 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 RN7SKP95-201ENST00000362860 303 ntBASIC3.48□□□□□ -1.85
APOBP04114 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.48□□□□□ -1.85
APOBP04114 LDHAP2-201ENST00000437325 985 ntBASIC3.48□□□□□ -1.85
APOBP04114 AC015983.1-201ENST00000441577 373 ntBASIC3.48□□□□□ -1.85
APOBP04114 VDAC2P4-201ENST00000452925 711 ntBASIC3.48□□□□□ -1.85
APOBP04114 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.48□□□□□ -1.85
APOBP04114 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.48□□□□□ -1.85
APOBP04114 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 AC012414.7-202ENST00000622705 1090 ntBASIC3.48□□□□□ -1.85
APOBP04114 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
APOBP04114 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
APOBP04114 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 IRF5P1-201ENST00000504852 2164 ntBASIC3.48□□□□□ -1.85
APOBP04114 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 DPY19L1P1-201ENST00000417811 2594 ntBASIC3.48□□□□□ -1.85
APOBP04114 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 RN7SKP100-201ENST00000411258 284 ntBASIC3.48□□□□□ -1.85
APOBP04114 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC3.48□□□□□ -1.85
APOBP04114 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.48□□□□□ -1.85
APOBP04114 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC3.48□□□□□ -1.85
APOBP04114 NDUFA5P9-201ENST00000472609 340 ntBASIC3.48□□□□□ -1.85
APOBP04114 MRPS33P2-201ENST00000507850 322 ntBASIC3.48□□□□□ -1.85
APOBP04114 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC3.48□□□□□ -1.85
APOBP04114 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC3.48□□□□□ -1.85
APOBP04114 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.48□□□□□ -1.85
APOBP04114 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.48□□□□□ -1.85
APOBP04114 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
APOBP04114 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC3.48□□□□□ -1.85
APOBP04114 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC3.47□□□□□ -1.85
APOBP04114 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
APOBP04114 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms