Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL138899.2-201ENST00000439139 499 ntBASIC6.29□□□□□ -1.4
APOEP02649 AL390879.1-201ENST00000439143 386 ntBASIC6.29□□□□□ -1.4
APOEP02649 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
APOEP02649 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.29□□□□□ -1.4
APOEP02649 RPL5P10-201ENST00000445207 894 ntBASIC6.29□□□□□ -1.4
APOEP02649 CFL1P4-201ENST00000451536 498 ntBASIC6.29□□□□□ -1.4
APOEP02649 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.29□□□□□ -1.4
APOEP02649 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.29□□□□□ -1.4
APOEP02649 TPM3P3-201ENST00000521343 354 ntBASIC6.29□□□□□ -1.4
APOEP02649 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
APOEP02649 AC005363.1-201ENST00000530779 351 ntBASIC6.29□□□□□ -1.4
APOEP02649 AC007956.1-201ENST00000555623 542 ntBASIC6.29□□□□□ -1.4
APOEP02649 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.29□□□□□ -1.4
APOEP02649 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.29□□□□□ -1.4
APOEP02649 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.29□□□□□ -1.4
APOEP02649 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.29□□□□□ -1.4
APOEP02649 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.29□□□□□ -1.4
APOEP02649 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.29□□□□□ -1.4
APOEP02649 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
APOEP02649 AC114876.1-201ENST00000490962 1366 ntBASIC6.29□□□□□ -1.4
APOEP02649 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
APOEP02649 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
APOEP02649 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
APOEP02649 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
APOEP02649 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
APOEP02649 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.28□□□□□ -1.4
APOEP02649 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
APOEP02649 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
APOEP02649 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
APOEP02649 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.28□□□□□ -1.4
APOEP02649 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
APOEP02649 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
APOEP02649 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
APOEP02649 NPM1P37-201ENST00000403105 874 ntBASIC6.28□□□□□ -1.4
APOEP02649 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.28□□□□□ -1.4
APOEP02649 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
APOEP02649 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
APOEP02649 AC115283.1-201ENST00000427353 400 ntBASIC6.28□□□□□ -1.4
APOEP02649 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
APOEP02649 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.28□□□□□ -1.4
APOEP02649 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
APOEP02649 AC079905.1-201ENST00000549280 475 ntBASIC6.28□□□□□ -1.4
APOEP02649 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.28□□□□□ -1.4
APOEP02649 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.28□□□□□ -1.4
APOEP02649 AC090236.2-201ENST00000587933 1101 ntBASIC6.28□□□□□ -1.4
APOEP02649 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.28□□□□□ -1.4
APOEP02649 AC004890.3-201ENST00000605566 1095 ntBASIC6.28□□□□□ -1.4
APOEP02649 RPL12P48-201ENST00000605620 304 ntBASIC6.28□□□□□ -1.4
APOEP02649 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.28□□□□□ -1.4
APOEP02649 AC096708.4-201ENST00000620563 552 ntBASIC6.28□□□□□ -1.4
APOEP02649 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.28□□□□□ -1.4
APOEP02649 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
APOEP02649 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
APOEP02649 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
APOEP02649 QRSL1P1-201ENST00000400977 1540 ntBASIC6.28□□□□□ -1.4
APOEP02649 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
APOEP02649 GNL2P1-201ENST00000451274 2190 ntBASIC6.28□□□□□ -1.4
APOEP02649 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.28□□□□□ -1.4
APOEP02649 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
APOEP02649 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
APOEP02649 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
APOEP02649 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
APOEP02649 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
APOEP02649 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
APOEP02649 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
APOEP02649 AC119674.1-202ENST00000641333 1860 ntBASIC6.28□□□□□ -1.4
APOEP02649 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.27□□□□□ -1.4
APOEP02649 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
APOEP02649 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.27□□□□□ -1.41
APOEP02649 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
APOEP02649 AC022164.1-201ENST00000568767 2673 ntBASIC6.27□□□□□ -1.41
APOEP02649 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.27□□□□□ -1.41
APOEP02649 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
APOEP02649 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.27□□□□□ -1.41
APOEP02649 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
APOEP02649 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
APOEP02649 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
APOEP02649 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
APOEP02649 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
APOEP02649 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
APOEP02649 RN7SKP275-201ENST00000364626 301 ntBASIC6.27□□□□□ -1.41
APOEP02649 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.27□□□□□ -1.41
APOEP02649 MRPS21P2-201ENST00000424704 264 ntBASIC6.27□□□□□ -1.41
APOEP02649 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.27□□□□□ -1.41
APOEP02649 AC002069.1-201ENST00000429649 1159 ntBASIC6.27□□□□□ -1.41
APOEP02649 NPM1P25-201ENST00000429734 854 ntBASIC6.27□□□□□ -1.41
APOEP02649 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.27□□□□□ -1.41
APOEP02649 AL445466.1-201ENST00000448432 357 ntBASIC6.27□□□□□ -1.41
APOEP02649 AC005077.1-201ENST00000449226 375 ntBASIC6.27□□□□□ -1.41
APOEP02649 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
APOEP02649 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.27□□□□□ -1.41
APOEP02649 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.27□□□□□ -1.41
APOEP02649 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.27□□□□□ -1.41
APOEP02649 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.27□□□□□ -1.41
APOEP02649 AC027369.2-201ENST00000528030 440 ntBASIC6.27□□□□□ -1.41
APOEP02649 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.27□□□□□ -1.41
APOEP02649 HNRNPCP1-201ENST00000556181 766 ntBASIC6.27□□□□□ -1.41
APOEP02649 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.27□□□□□ -1.41
APOEP02649 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.27□□□□□ -1.41
APOEP02649 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms