Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
COL1A1P02452 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL1A1P02452 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL1A1P02452 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL1A1P02452 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL1A1P02452 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
COL1A1P02452 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL1A1P02452 RNU1-19P-201ENST00000363306 165 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 SPTLC1P2-201ENST00000407089 121 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.04□□□□□ -1.28
COL1A1P02452 AC113412.1-201ENST00000425840 504 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 NPM1P22-201ENST00000427761 952 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.04□□□□□ -1.28
COL1A1P02452 RPL7L1P3-201ENST00000455249 689 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 RPL32P9-201ENST00000487963 407 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC7.04□□□□□ -1.28
COL1A1P02452 AC073610.1-201ENST00000489971 396 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.04□□□□□ -1.28
COL1A1P02452 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.04□□□□□ -1.28
COL1A1P02452 NRBF2P4-201ENST00000520874 850 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 HMGB1P42-201ENST00000532126 553 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.04□□□□□ -1.28
COL1A1P02452 CASC19-222ENST00000641321 1173 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 SAMMSON-227ENST00000642114 1199 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL1A1P02452 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL1A1P02452 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL1A1P02452 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
COL1A1P02452 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL1A1P02452 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.04□□□□□ -1.28
COL1A1P02452 GTF2IP4-201ENST00000453092 2054 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.04□□□□□ -1.28
COL1A1P02452 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.04□□□□□ -1.28
COL1A1P02452 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
COL1A1P02452 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL1A1P02452 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
COL1A1P02452 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL1A1P02452 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL1A1P02452 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL1A1P02452 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.04□□□□□ -1.28
COL1A1P02452 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL1A1P02452 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL1A1P02452 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL1A1P02452 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL1A1P02452 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.04□□□□□ -1.28
COL1A1P02452 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.04□□□□□ -1.28
COL1A1P02452 TNPO1P1-201ENST00000423641 1138 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.04□□□□□ -1.28
COL1A1P02452 PTMAP6-201ENST00000439110 327 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.04□□□□□ -1.28
COL1A1P02452 RN7SL610P-201ENST00000463845 291 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL1A1P02452 AC231760.1-201ENST00000498002 260 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 FTH1P8-201ENST00000498161 514 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.04□□□□□ -1.28
COL1A1P02452 AC090424.1-201ENST00000535243 736 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 AL049779.3-201ENST00000557141 606 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.04□□□□□ -1.28
COL1A1P02452 AC044860.2-201ENST00000561005 179 ntBASIC7.04□□□□□ -1.28
COL1A1P02452 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC7.04□□□□□ -1.28
COL1A1P02452 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.04□□□□□ -1.28
COL1A1P02452 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL1A1P02452 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL1A1P02452 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.04□□□□□ -1.28
COL1A1P02452 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
COL1A1P02452 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.04□□□□□ -1.28
COL1A1P02452 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL1A1P02452 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
COL1A1P02452 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
COL1A1P02452 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL1A1P02452 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
COL1A1P02452 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
COL1A1P02452 LINC02019-201ENST00000608605 2060 ntBASIC7.03□□□□□ -1.28
COL1A1P02452 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL1A1P02452 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL1A1P02452 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL1A1P02452 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL1A1P02452 PABPC1P6-201ENST00000445594 1829 ntBASIC7.03□□□□□ -1.28
COL1A1P02452 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
COL1A1P02452 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC7.03□□□□□ -1.28
COL1A1P02452 RN7SKP59-201ENST00000410520 314 ntBASIC7.03□□□□□ -1.28
COL1A1P02452 GABARAPL3-201ENST00000412799 354 ntBASIC7.03□□□□□ -1.28
COL1A1P02452 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.03□□□□□ -1.28
COL1A1P02452 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.03□□□□□ -1.28
COL1A1P02452 SNORA43.3-201ENST00000517240 103 ntBASIC7.03□□□□□ -1.28
COL1A1P02452 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.03□□□□□ -1.28
COL1A1P02452 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC7.03□□□□□ -1.28
COL1A1P02452 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.03□□□□□ -1.28
COL1A1P02452 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC7.03□□□□□ -1.28
COL1A1P02452 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.03□□□□□ -1.28
COL1A1P02452 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.03□□□□□ -1.28
COL1A1P02452 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
COL1A1P02452 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.03□□□□□ -1.28
COL1A1P02452 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL1A1P02452 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL1A1P02452 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL1A1P02452 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.02□□□□□ -1.28
COL1A1P02452 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC7.02□□□□□ -1.28
COL1A1P02452 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.02□□□□□ -1.28
COL1A1P02452 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms