Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.8□□□□□ -1.48
TNFP01375 NENFP3-201ENST00000503735 313 ntBASIC5.8□□□□□ -1.48
TNFP01375 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.8□□□□□ -1.48
TNFP01375 AC027667.1-201ENST00000545814 304 ntBASIC5.8□□□□□ -1.48
TNFP01375 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.8□□□□□ -1.48
TNFP01375 AC103968.1-201ENST00000557841 573 ntBASIC5.8□□□□□ -1.48
TNFP01375 AC090651.1-201ENST00000567865 634 ntBASIC5.8□□□□□ -1.48
TNFP01375 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.8□□□□□ -1.48
TNFP01375 RN7SL787P-201ENST00000613000 284 ntBASIC5.8□□□□□ -1.48
TNFP01375 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.8□□□□□ -1.48
TNFP01375 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TNFP01375 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
TNFP01375 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.8□□□□□ -1.48
TNFP01375 AL353763.1-201ENST00000624467 1628 ntBASIC5.8□□□□□ -1.48
TNFP01375 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TNFP01375 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.8□□□□□ -1.48
TNFP01375 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.8□□□□□ -1.48
TNFP01375 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TNFP01375 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.8□□□□□ -1.48
TNFP01375 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TNFP01375 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
TNFP01375 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TNFP01375 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.79□□□□□ -1.48
TNFP01375 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
TNFP01375 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TNFP01375 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.79□□□□□ -1.48
TNFP01375 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TNFP01375 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.79□□□□□ -1.48
TNFP01375 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
TNFP01375 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TNFP01375 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TNFP01375 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TNFP01375 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TNFP01375 RNA5SP500-201ENST00000364486 119 ntBASIC5.79□□□□□ -1.48
TNFP01375 RNA5SP211-201ENST00000365516 117 ntBASIC5.79□□□□□ -1.48
TNFP01375 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TNFP01375 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.79□□□□□ -1.48
TNFP01375 OR2AT2P-201ENST00000413438 905 ntBASIC5.79□□□□□ -1.48
TNFP01375 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.79□□□□□ -1.48
TNFP01375 AC016027.5-201ENST00000427227 210 ntBASIC5.79□□□□□ -1.48
TNFP01375 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.79□□□□□ -1.48
TNFP01375 AC023141.8-201ENST00000442554 208 ntBASIC5.79□□□□□ -1.48
TNFP01375 AL162739.1-201ENST00000450606 307 ntBASIC5.79□□□□□ -1.48
TNFP01375 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.79□□□□□ -1.48
TNFP01375 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.79□□□□□ -1.48
TNFP01375 RN7SL717P-201ENST00000478343 297 ntBASIC5.79□□□□□ -1.48
TNFP01375 RPL17P2-201ENST00000491913 451 ntBASIC5.79□□□□□ -1.48
TNFP01375 AC109481.1-201ENST00000509173 282 ntBASIC5.79□□□□□ -1.48
TNFP01375 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.79□□□□□ -1.48
TNFP01375 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TNFP01375 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.79□□□□□ -1.48
TNFP01375 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.79□□□□□ -1.48
TNFP01375 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.79□□□□□ -1.48
TNFP01375 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.79□□□□□ -1.48
TNFP01375 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.79□□□□□ -1.48
TNFP01375 MIR4260-201ENST00000583107 67 ntBASIC5.79□□□□□ -1.48
TNFP01375 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.79□□□□□ -1.48
TNFP01375 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.79□□□□□ -1.48
TNFP01375 AC009237.12-201ENST00000604755 742 ntBASIC5.79□□□□□ -1.48
TNFP01375 AC004890.3-201ENST00000605566 1095 ntBASIC5.79□□□□□ -1.48
TNFP01375 RPL12P48-201ENST00000605620 304 ntBASIC5.79□□□□□ -1.48
TNFP01375 AL352984.2-201ENST00000611153 546 ntBASIC5.79□□□□□ -1.48
TNFP01375 AP001885.1-201ENST00000621658 558 ntBASIC5.79□□□□□ -1.48
TNFP01375 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.79□□□□□ -1.48
TNFP01375 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.79□□□□□ -1.48
TNFP01375 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.79□□□□□ -1.48
TNFP01375 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TNFP01375 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TNFP01375 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TNFP01375 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TNFP01375 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TNFP01375 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TNFP01375 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TNFP01375 AL355377.1-201ENST00000621125 1653 ntBASIC5.79□□□□□ -1.48
TNFP01375 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNFP01375 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.78□□□□□ -1.48
TNFP01375 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TNFP01375 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.78□□□□□ -1.48
TNFP01375 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNFP01375 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TNFP01375 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
TNFP01375 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TNFP01375 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
TNFP01375 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TNFP01375 AC093829.1-201ENST00000506662 1618 ntBASIC5.78□□□□□ -1.48
TNFP01375 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.78□□□□□ -1.48
TNFP01375 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
TNFP01375 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TNFP01375 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TNFP01375 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNFP01375 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.78□□□□□ -1.48
TNFP01375 RN7SKP29-201ENST00000410957 272 ntBASIC5.78□□□□□ -1.48
TNFP01375 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.78□□□□□ -1.48
TNFP01375 MRPL53P1-201ENST00000414323 319 ntBASIC5.78□□□□□ -1.48
TNFP01375 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TNFP01375 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.78□□□□□ -1.48
TNFP01375 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.78□□□□□ -1.48
TNFP01375 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.78□□□□□ -1.48
TNFP01375 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.78□□□□□ -1.48
TNFP01375 AL663074.2-201ENST00000440621 479 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms