Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 NPIPB14P-203ENST00000532298 987 ntBASIC5.63□□□□□ -1.51
SCN2BO60939 BTG1P1-201ENST00000540396 508 ntBASIC5.63□□□□□ -1.51
SCN2BO60939 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN2BO60939 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCN2BO60939 BMS1P16-201ENST00000556075 1147 ntBASIC5.63□□□□□ -1.51
SCN2BO60939 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN2BO60939 AC090826.1-203ENST00000569235 490 ntBASIC5.63□□□□□ -1.51
SCN2BO60939 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN2BO60939 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN2BO60939 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN2BO60939 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN2BO60939 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
SCN2BO60939 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.63□□□□□ -1.51
SCN2BO60939 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SCN2BO60939 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN2BO60939 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN2BO60939 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
SCN2BO60939 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCN2BO60939 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN2BO60939 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SCN2BO60939 RBMY1HP-201ENST00000382759 1389 ntBASIC5.63□□□□□ -1.51
SCN2BO60939 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCN2BO60939 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SCN2BO60939 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
SCN2BO60939 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCN2BO60939 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.63□□□□□ -1.51
SCN2BO60939 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.63□□□□□ -1.51
SCN2BO60939 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCN2BO60939 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN2BO60939 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
SCN2BO60939 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SCN2BO60939 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SCN2BO60939 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SCN2BO60939 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.62□□□□□ -1.51
SCN2BO60939 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.62□□□□□ -1.51
SCN2BO60939 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.62□□□□□ -1.51
SCN2BO60939 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 AC138907.8-201ENST00000623981 2256 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 AC004656.1-201ENST00000568479 4951 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.62□□□□□ -1.51
SCN2BO60939 RN7SKP146-201ENST00000410242 334 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 RN7SKP279-201ENST00000411383 298 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 RPL35AP3-201ENST00000414680 288 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 AL354868.1-201ENST00000417077 482 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 DPPA2P2-201ENST00000418220 897 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 AC099782.1-201ENST00000425889 474 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.62□□□□□ -1.51
SCN2BO60939 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.62□□□□□ -1.51
SCN2BO60939 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.62□□□□□ -1.51
SCN2BO60939 AC104164.1-201ENST00000460282 590 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 CR383656.1-201ENST00000484916 377 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 RPL29P23-201ENST00000486188 442 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 PDCL3P4-201ENST00000489621 720 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.62□□□□□ -1.51
SCN2BO60939 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.62□□□□□ -1.51
SCN2BO60939 HMGN1P17-201ENST00000513734 295 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 AC110056.1-201ENST00000525759 911 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 BCAS2P1-201ENST00000528022 632 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 AC090424.1-201ENST00000535243 736 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.62□□□□□ -1.51
SCN2BO60939 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.62□□□□□ -1.51
SCN2BO60939 AC060780.2-201ENST00000589047 198 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.62□□□□□ -1.51
SCN2BO60939 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.62□□□□□ -1.51
SCN2BO60939 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.62□□□□□ -1.51
SCN2BO60939 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.62□□□□□ -1.51
SCN2BO60939 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SCN2BO60939 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.62□□□□□ -1.51
SCN2BO60939 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN2BO60939 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN2BO60939 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCN2BO60939 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN2BO60939 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SCN2BO60939 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN2BO60939 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SCN2BO60939 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN2BO60939 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN2BO60939 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCN2BO60939 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SCN2BO60939 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN2BO60939 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCN2BO60939 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms