Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
O00370 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
O00370 COX6B1P3-201ENST00000312310 260 ntBASIC6.39□□□□□ -1.39
O00370 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
O00370 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
O00370 SNORA11.5-201ENST00000408163 128 ntBASIC6.39□□□□□ -1.39
O00370 RNU2-18P-201ENST00000411224 162 ntBASIC6.39□□□□□ -1.39
O00370 RANP7-201ENST00000418085 644 ntBASIC6.39□□□□□ -1.39
O00370 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.39□□□□□ -1.39
O00370 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
O00370 Z83838.1-202ENST00000456225 839 ntBASIC6.39□□□□□ -1.39
O00370 AC135999.1-201ENST00000478962 479 ntBASIC6.39□□□□□ -1.39
O00370 AP002884.1-201ENST00000479691 655 ntBASIC6.39□□□□□ -1.39
O00370 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.39□□□□□ -1.39
O00370 CCDC11P1-201ENST00000503137 1162 ntBASIC6.39□□□□□ -1.39
O00370 AC111000.5-201ENST00000506559 1178 ntBASIC6.39□□□□□ -1.39
O00370 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.39□□□□□ -1.39
O00370 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
O00370 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.39□□□□□ -1.39
O00370 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
O00370 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.39□□□□□ -1.39
O00370 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.39□□□□□ -1.39
O00370 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.39□□□□□ -1.39
O00370 MIR4271-201ENST00000582451 67 ntBASIC6.39□□□□□ -1.39
O00370 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.39□□□□□ -1.39
O00370 AC107993.1-201ENST00000591343 684 ntBASIC6.39□□□□□ -1.39
O00370 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.39□□□□□ -1.39
O00370 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.39□□□□□ -1.39
O00370 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.39□□□□□ -1.39
O00370 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
O00370 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
O00370 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
O00370 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
O00370 AC114876.1-201ENST00000490962 1366 ntBASIC6.39□□□□□ -1.39
O00370 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
O00370 AC093225.1-201ENST00000506867 1408 ntBASIC6.39□□□□□ -1.39
O00370 MTCO1P46-201ENST00000451639 1491 ntBASIC6.39□□□□□ -1.39
O00370 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
O00370 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.39□□□□□ -1.39
O00370 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.39□□□□□ -1.39
O00370 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
O00370 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
O00370 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.38□□□□□ -1.39
O00370 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.38□□□□□ -1.39
O00370 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC6.38□□□□□ -1.39
O00370 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
O00370 RPL35AP3-201ENST00000414680 288 ntBASIC6.38□□□□□ -1.39
O00370 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.38□□□□□ -1.39
O00370 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.38□□□□□ -1.39
O00370 RPL24P2-201ENST00000421023 475 ntBASIC6.38□□□□□ -1.39
O00370 NMD3P2-201ENST00000421815 761 ntBASIC6.38□□□□□ -1.39
O00370 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.38□□□□□ -1.39
O00370 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.38□□□□□ -1.39
O00370 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
O00370 AMYP1-201ENST00000440059 1023 ntBASIC6.38□□□□□ -1.39
O00370 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.38□□□□□ -1.39
O00370 AL445466.1-201ENST00000448432 357 ntBASIC6.38□□□□□ -1.39
O00370 AL162739.1-201ENST00000450606 307 ntBASIC6.38□□□□□ -1.39
O00370 SDC4P-201ENST00000453285 601 ntBASIC6.38□□□□□ -1.39
O00370 PPIAP27-201ENST00000453800 265 ntBASIC6.38□□□□□ -1.39
O00370 AC068228.1-201ENST00000461723 211 ntBASIC6.38□□□□□ -1.39
O00370 RN7SKP238-201ENST00000516483 249 ntBASIC6.38□□□□□ -1.39
O00370 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.38□□□□□ -1.39
O00370 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.38□□□□□ -1.39
O00370 BCAS2P1-201ENST00000528022 632 ntBASIC6.38□□□□□ -1.39
O00370 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.38□□□□□ -1.39
O00370 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.38□□□□□ -1.39
O00370 AC244502.2-201ENST00000543361 851 ntBASIC6.38□□□□□ -1.39
O00370 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.38□□□□□ -1.39
O00370 NPM1P5-201ENST00000557228 838 ntBASIC6.38□□□□□ -1.39
O00370 CYCSP38-201ENST00000559840 322 ntBASIC6.38□□□□□ -1.39
O00370 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
O00370 AL136228.1-201ENST00000622221 319 ntBASIC6.38□□□□□ -1.39
O00370 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.38□□□□□ -1.39
O00370 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
O00370 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
O00370 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
O00370 IFIT1P1-201ENST00000400497 1449 ntBASIC6.38□□□□□ -1.39
O00370 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
O00370 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.38□□□□□ -1.39
O00370 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
O00370 AC137056.2-201ENST00000624055 1958 ntBASIC6.38□□□□□ -1.39
O00370 GNL2P1-201ENST00000451274 2190 ntBASIC6.38□□□□□ -1.39
O00370 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.38□□□□□ -1.39
O00370 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.38□□□□□ -1.39
O00370 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
O00370 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
O00370 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
O00370 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
O00370 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.38□□□□□ -1.39
O00370 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.37□□□□□ -1.39
O00370 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
O00370 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.37□□□□□ -1.39
O00370 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
O00370 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
O00370 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.37□□□□□ -1.39
O00370 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.37□□□□□ -1.39
O00370 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
O00370 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
O00370 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms