Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC068768.2-201ENST00000602352 343 ntBASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AC091167.5-201ENST00000605689 894 ntBASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AC009120.7-201ENST00000623452 780 ntBASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AC073488.3-201ENST00000631611 778 ntBASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 SYT14P1-202ENST00000600441 1448 ntBASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AC022164.1-201ENST00000568767 2673 ntBASIC5.71□□□□□ -1.49
ATG4BQ9Y4P1 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.71□□□□□ -1.49
ATG4BQ9Y4P1 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ATG4BQ9Y4P1 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ATG4BQ9Y4P1 AC005225.5-201ENST00000623547 2225 ntBASIC5.71□□□□□ -1.49
ATG4BQ9Y4P1 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.71□□□□□ -1.49
ATG4BQ9Y4P1 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
ATG4BQ9Y4P1 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AL354854.1-201ENST00000455940 1363 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AC005261.2-201ENST00000593427 4258 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 OR10R3P-201ENST00000361688 942 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 RNA5SP433-201ENST00000364491 114 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 SNORA70.9-201ENST00000384370 135 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AC245096.1-201ENST00000413104 546 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 PNKDP1-201ENST00000435914 430 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AC097463.1-201ENST00000447288 481 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AL162739.1-201ENST00000450606 307 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AC009963.3-201ENST00000458090 486 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 RPS26P24-201ENST00000497656 331 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 OR5D2P-201ENST00000524390 911 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 OR56A7P-201ENST00000524865 941 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AC092332.1-201ENST00000563684 829 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AL136097.3-201ENST00000611097 505 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AC087821.1-201ENST00000623639 567 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AC025262.3-201ENST00000623666 360 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 CR383656.5-201ENST00000547616 1340 ntBASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
ATG4BQ9Y4P1 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 HSPD1P9-201ENST00000420325 1636 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AC114876.1-201ENST00000490962 1366 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AC027279.4-201ENST00000624371 2072 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 MTCO1P28-201ENST00000574177 1528 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 SNORA51.9-201ENST00000384295 124 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 RN7SKP166-201ENST00000410812 305 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AC013268.2-201ENST00000420753 337 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AMYP1-201ENST00000440059 1023 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 TRIM60P16-201ENST00000444048 694 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms