Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
IFT52Q9Y366 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
IFT52Q9Y366 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT52Q9Y366 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT52Q9Y366 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT52Q9Y366 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.68□□□□□ -1.5
IFT52Q9Y366 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.68□□□□□ -1.5
IFT52Q9Y366 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT52Q9Y366 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
IFT52Q9Y366 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT52Q9Y366 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT52Q9Y366 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
IFT52Q9Y366 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
IFT52Q9Y366 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
IFT52Q9Y366 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
IFT52Q9Y366 AC138907.8-201ENST00000623981 2256 ntBASIC5.67□□□□□ -1.5
IFT52Q9Y366 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
IFT52Q9Y366 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 AC094019.1-201ENST00000434678 472 ntBASIC5.67□□□□□ -1.5
IFT52Q9Y366 OR3D1P-201ENST00000438288 955 ntBASIC5.67□□□□□ -1.5
IFT52Q9Y366 RBMY2HP-201ENST00000457961 720 ntBASIC5.67□□□□□ -1.5
IFT52Q9Y366 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 RNA5SP206-201ENST00000516703 121 ntBASIC5.67□□□□□ -1.5
IFT52Q9Y366 FTH1P11-201ENST00000517577 551 ntBASIC5.67□□□□□ -1.5
IFT52Q9Y366 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 BMS1P16-201ENST00000556075 1147 ntBASIC5.67□□□□□ -1.5
IFT52Q9Y366 AL049779.3-201ENST00000557141 606 ntBASIC5.67□□□□□ -1.5
IFT52Q9Y366 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 AC011416.1-201ENST00000514947 1732 ntBASIC5.67□□□□□ -1.5
IFT52Q9Y366 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
IFT52Q9Y366 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
IFT52Q9Y366 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.67□□□□□ -1.5
IFT52Q9Y366 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
IFT52Q9Y366 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
IFT52Q9Y366 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
IFT52Q9Y366 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
IFT52Q9Y366 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
IFT52Q9Y366 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
IFT52Q9Y366 AC016583.1-201ENST00000624221 2431 ntBASIC5.66□□□□□ -1.5
IFT52Q9Y366 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
IFT52Q9Y366 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
IFT52Q9Y366 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.66□□□□□ -1.5
IFT52Q9Y366 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
IFT52Q9Y366 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
IFT52Q9Y366 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
IFT52Q9Y366 AL157702.1-201ENST00000398764 426 ntBASIC5.66□□□□□ -1.5
IFT52Q9Y366 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.66□□□□□ -1.5
IFT52Q9Y366 AL139805.1-201ENST00000407837 289 ntBASIC5.66□□□□□ -1.5
IFT52Q9Y366 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.66□□□□□ -1.5
IFT52Q9Y366 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.66□□□□□ -1.5
IFT52Q9Y366 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.66□□□□□ -1.5
IFT52Q9Y366 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.66□□□□□ -1.5
IFT52Q9Y366 AL645936.1-201ENST00000441979 518 ntBASIC5.66□□□□□ -1.5
IFT52Q9Y366 AC245291.3-201ENST00000443400 292 ntBASIC5.66□□□□□ -1.5
IFT52Q9Y366 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.66□□□□□ -1.5
IFT52Q9Y366 AL162739.1-201ENST00000450606 307 ntBASIC5.66□□□□□ -1.5
IFT52Q9Y366 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.66□□□□□ -1.5
IFT52Q9Y366 AC124945.1-201ENST00000485133 188 ntBASIC5.66□□□□□ -1.5
IFT52Q9Y366 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.66□□□□□ -1.5
IFT52Q9Y366 AC117500.1-201ENST00000497352 755 ntBASIC5.66□□□□□ -1.5
IFT52Q9Y366 AC111000.5-201ENST00000506559 1178 ntBASIC5.66□□□□□ -1.5
IFT52Q9Y366 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
IFT52Q9Y366 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.66□□□□□ -1.5
IFT52Q9Y366 MIR3157-201ENST00000578688 85 ntBASIC5.66□□□□□ -1.5
IFT52Q9Y366 AP001823.1-201ENST00000604056 1003 ntBASIC5.66□□□□□ -1.5
IFT52Q9Y366 RN7SL261P-201ENST00000613441 282 ntBASIC5.66□□□□□ -1.5
IFT52Q9Y366 AL512356.3-201ENST00000623005 461 ntBASIC5.66□□□□□ -1.5
IFT52Q9Y366 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.66□□□□□ -1.5
IFT52Q9Y366 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.66□□□□□ -1.5
IFT52Q9Y366 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
IFT52Q9Y366 AL133243.2-201ENST00000610331 1621 ntBASIC5.66□□□□□ -1.5
IFT52Q9Y366 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
IFT52Q9Y366 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.66□□□□□ -1.5
IFT52Q9Y366 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
IFT52Q9Y366 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
IFT52Q9Y366 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
IFT52Q9Y366 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
IFT52Q9Y366 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.65□□□□□ -1.5
IFT52Q9Y366 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
IFT52Q9Y366 AL121839.2-201ENST00000565058 6943 ntBASIC5.65□□□□□ -1.5
IFT52Q9Y366 AC024587.1-201ENST00000505925 2157 ntBASIC5.65□□□□□ -1.5
IFT52Q9Y366 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
IFT52Q9Y366 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
IFT52Q9Y366 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.65□□□□□ -1.5
IFT52Q9Y366 AC093849.1-201ENST00000563631 2209 ntBASIC5.65□□□□□ -1.5
IFT52Q9Y366 RPL11P4-201ENST00000332269 436 ntBASIC5.65□□□□□ -1.5
IFT52Q9Y366 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.65□□□□□ -1.5
IFT52Q9Y366 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms