Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 AC060780.2-201ENST00000589047 198 ntBASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 AC022106.1-201ENST00000612834 766 ntBASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 MIR6889-201ENST00000613185 59 ntBASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 RN7SL261P-201ENST00000613441 282 ntBASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 AC119674.1-217ENST00000641942 1086 ntBASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 EIF3EP1-201ENST00000433978 1316 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 RPS15AP30-201ENST00000420976 390 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 RPL12P12-201ENST00000424633 501 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 RPSAP65-201ENST00000429660 595 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 SEPT14P12-201ENST00000442280 560 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 RPSAP40-201ENST00000442343 891 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 EEF1B2P3-201ENST00000447718 678 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 OR52I1-201ENST00000450052 1050 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 RPL23AP40-201ENST00000487630 390 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 AC122718.2-201ENST00000505325 591 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 AC018797.1-201ENST00000510791 255 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 AC021269.1-201ENST00000526860 705 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 AC004232.2-201ENST00000574245 821 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 MIR3154-201ENST00000577829 84 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 FAM27E2-201ENST00000619668 403 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 AL591926.1-201ENST00000620542 217 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 AC073488.6-201ENST00000632293 754 ntBASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.5□□□□□ -1.53
TRAPPC4Q9Y296 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 AC024587.1-201ENST00000505925 2157 ntBASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 HSPD1P9-201ENST00000420325 1636 ntBASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 PTCD2P2-201ENST00000415579 1095 ntBASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 AC118758.1-202ENST00000454719 225 ntBASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 AC026782.2-201ENST00000510845 636 ntBASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 RN7SKP183-201ENST00000517169 324 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms