Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRFN1Q9P244 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRFN1Q9P244 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRFN1Q9P244 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 RNU1-24P-201ENST00000364285 165 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 RNA5SP512-201ENST00000364550 120 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 GCNT6-201ENST00000379591 934 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRFN1Q9P244 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 AL035405.1-201ENST00000400795 710 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 MIR541-201ENST00000401360 84 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 RNU2-22P-201ENST00000411266 212 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 AL590806.1-201ENST00000415818 853 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 ARMC4P1-201ENST00000438905 707 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC010240.2-201ENST00000445363 1205 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRFN1Q9P244 SYT14P1-201ENST00000481459 721 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC116562.1-201ENST00000485355 781 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC117395.1-201ENST00000487390 403 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 PFN1P8-201ENST00000497012 543 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC108120.2-201ENST00000512973 294 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 MAST4-IT1-201ENST00000514241 658 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 OR52K3P-201ENST00000531655 943 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 BNIP3P27-201ENST00000599991 412 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 AL078623.1-201ENST00000602702 907 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC004805.3-201ENST00000603178 310 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC139493.1-201ENST00000604368 397 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LRFN1Q9P244 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 AL354718.1-201ENST00000619764 589 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC073592.6-201ENST00000624271 415 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 AC114546.4-201ENST00000624413 369 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 AL121936.2-201ENST00000641935 662 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRFN1Q9P244 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRFN1Q9P244 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 ZNF658B-201ENST00000602828 3408 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRFN1Q9P244 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.03□□□□□ -1.44
LRFN1Q9P244 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.03□□□□□ -1.44
LRFN1Q9P244 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LRFN1Q9P244 MSL3P1-202ENST00000440028 1468 ntBASIC6.02□□□□□ -1.44
LRFN1Q9P244 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
LRFN1Q9P244 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
LRFN1Q9P244 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 AL121950.1-201ENST00000624993 2077 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 RNA5SP122-201ENST00000384457 108 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 AL391419.1-201ENST00000398901 1275 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 CHMP1B2P-201ENST00000399581 597 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 RPL23AP4-201ENST00000427757 463 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 AL160175.1-201ENST00000428124 247 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 KCTD9P1-201ENST00000430462 1167 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms