Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MTCO1P28-201ENST00000574177 1528 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 HSPD1P9-201ENST00000420325 1636 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 MYL6P5-201ENST00000412707 459 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AC007679.3-201ENST00000434035 414 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AL392003.1-201ENST00000434394 243 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 CLNS1AP1-201ENST00000435954 682 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 RPS12P17-201ENST00000438591 377 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 H3F3BP1-201ENST00000440551 403 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 CUBNP2-201ENST00000443534 1139 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AC093166.3-201ENST00000448785 303 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 OR56A7P-201ENST00000524865 941 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AC023310.2-201ENST00000553844 547 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AL845552.1-201ENST00000556820 323 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AC009303.3-201ENST00000591103 736 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AC091167.5-201ENST00000605689 894 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 OR7M1P-201ENST00000608946 533 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AC092681.3-201ENST00000609463 678 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AC092266.1-201ENST00000610958 165 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 MIR6809-201ENST00000612189 116 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AL136228.1-201ENST00000622221 319 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 AC104966.1-201ENST00000467010 1464 ntBASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.7□□□□□ -1.34
BLOC1S4Q9NUP1 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 RNU1-65P-201ENST00000363919 148 ntBASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 RNU6-891P-201ENST00000384280 111 ntBASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 AL096800.1-201ENST00000405326 893 ntBASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 AC117434.1-201ENST00000419971 836 ntBASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 GAPDHP75-201ENST00000433910 943 ntBASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 AL445466.1-201ENST00000448432 357 ntBASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 TOMM22P4-201ENST00000511318 336 ntBASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 HMGN2P47-201ENST00000559378 272 ntBASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 AC069234.4-201ENST00000621276 412 ntBASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 GNL2P1-201ENST00000451274 2190 ntBASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 AC073365.1-203ENST00000641055 1992 ntBASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
BLOC1S4Q9NUP1 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AC130304.1-201ENST00000622942 2385 ntBASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms