Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 CLDN2-201ENST00000336803 2959 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 RN7SKP269-201ENST00000365545 319 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 GAS8-AS1-201ENST00000408886 435 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 RN7SKP119-201ENST00000410753 273 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 HMGB3P20-201ENST00000417997 600 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 AL953862.1-201ENST00000423016 168 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 SDCBPP2-201ENST00000424643 885 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 RPL7P11-201ENST00000437586 658 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 MTND6P13-201ENST00000443510 523 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 OR7A15P-201ENST00000449848 1009 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 RPL26P28-201ENST00000451325 435 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 AC010608.1-201ENST00000507964 275 ntTSL 4 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 snoU109.5-201ENST00000516231 132 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 RNU6-1261P-201ENST00000517194 104 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 ZNF322P1-201ENST00000568013 1209 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 RN7SL785P-201ENST00000578437 253 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 AP001017.1-201ENST00000591378 482 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 ZNF83-209ENST00000596930 560 ntTSL 4 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 AL132765.2-201ENST00000610812 351 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 MIR6070-201ENST00000613967 103 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 AC138305.3-201ENST00000624988 240 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 AC247036.7-201ENST00000639643 304 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 AC119674.1-212ENST00000641155 993 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 AC018647.1-202ENST00000449644 1651 ntTSL 5 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 MAPK6PS2-201ENST00000379571 2060 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 PPARG-209ENST00000397026 2029 ntTSL 5 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 AC104806.2-201ENST00000502400 1991 ntTSL 2 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHOX2BQ99453 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PHOX2BQ99453 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC8.38□□□□□ -1.07
PHOX2BQ99453 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC8.38□□□□□ -1.07
PHOX2BQ99453 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC8.38□□□□□ -1.07
PHOX2BQ99453 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.38□□□□□ -1.07
PHOX2BQ99453 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC8.38□□□□□ -1.07
PHOX2BQ99453 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC8.38□□□□□ -1.07
PHOX2BQ99453 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHOX2BQ99453 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC8.38□□□□□ -1.07
PHOX2BQ99453 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC8.38□□□□□ -1.07
PHOX2BQ99453 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHOX2BQ99453 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHOX2BQ99453 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC8.38□□□□□ -1.07
PHOX2BQ99453 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
PHOX2BQ99453 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHOX2BQ99453 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PHOX2BQ99453 OR5M9-201ENST00000279791 933 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
PHOX2BQ99453 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC8.38□□□□□ -1.07
PHOX2BQ99453 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms