Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AL353743.3-201ENST00000442109 1468 ntBASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 RNA5SP431-201ENST00000410312 120 ntBASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 MTND4LP7-201ENST00000431728 294 ntBASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 RPL7L1P3-201ENST00000455249 689 ntBASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AC008628.1-201ENST00000508663 265 ntBASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AC084121.1-201ENST00000533882 835 ntBASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AC027281.1-201ENST00000574178 758 ntBASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AC040174.2-201ENST00000602701 465 ntBASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 MIR7109-201ENST00000613748 65 ntBASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AC087565.3-202ENST00000642085 1603 ntBASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AC092070.2-203ENST00000598377 3644 ntBASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 AC011815.2-201ENST00000618230 2021 ntBASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 RNA5SP251-201ENST00000410614 137 ntBASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 AL157884.1-201ENST00000424561 454 ntBASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 AK3P5-201ENST00000432033 519 ntBASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 AC079922.1-201ENST00000443291 359 ntBASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 OR2L9P-201ENST00000444456 913 ntBASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 MTND2P39-201ENST00000457230 764 ntBASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 AC090115.2-201ENST00000548060 883 ntBASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 NPM1P5-201ENST00000557228 838 ntBASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 AC090888.3-201ENST00000558917 509 ntBASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 RN7SL230P-201ENST00000580835 303 ntBASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 AC022106.1-201ENST00000612834 766 ntBASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 AC116667.2-201ENST00000641075 823 ntBASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 SHQ1P1-201ENST00000437111 1544 ntBASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 AC018717.1-201ENST00000457712 1505 ntBASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 IFIT1P1-201ENST00000400497 1449 ntBASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 AC130360.2-201ENST00000533477 1556 ntBASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CHMP4CQ96CF2 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AC092692.1-201ENST00000623625 2595 ntBASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AC068446.1-201ENST00000556425 1549 ntBASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms