Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 FAM106CP-201ENST00000582212 507 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC027229.1-201ENST00000583887 253 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 AL391597.1-201ENST00000618707 694 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 AL133370.2-201ENST00000619934 439 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 CLUHP10-201ENST00000631979 980 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC003992.1-201ENST00000635364 557 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 CCNT2P1-201ENST00000423082 1315 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTP4A1Q93096 AC004158.1-201ENST00000564508 4319 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTP4A1Q93096 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTP4A1Q93096 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 SNORA7A-201ENST00000384765 139 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 SNORD65-201ENST00000391079 73 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 ARSFP1-201ENST00000398758 477 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 AL445238.1-204ENST00000400311 463 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 RN7SKP38-201ENST00000410782 309 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 AC002524.1-201ENST00000411687 547 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 AC016027.5-201ENST00000427227 210 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 AC092106.2-201ENST00000436597 487 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 RPL5P10-201ENST00000445207 894 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 AL157385.1-201ENST00000446973 268 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 Z83838.1-202ENST00000456225 839 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 AC093827.1-201ENST00000480094 861 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 AC018645.1-201ENST00000505003 109 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 HAUS1P1-201ENST00000505275 832 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 AC093870.1-201ENST00000506837 213 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 CYP4F27P-201ENST00000514557 494 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTP4A1Q93096 OR7E10P-201ENST00000526420 991 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTP4A1Q93096 AC023968.1-201ENST00000560719 475 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTP4A1Q93096 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 AC005332.4-201ENST00000592752 579 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 MIR6503-201ENST00000622884 86 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTP4A1Q93096 AC092451.3-201ENST00000625067 1343 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 FANCD2P2-201ENST00000437591 1400 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTP4A1Q93096 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTP4A1Q93096 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTP4A1Q93096 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTP4A1Q93096 MTCO1P8-201ENST00000416914 1523 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 VPS35P1-201ENST00000563400 1518 ntBASIC5.62□□□□□ -1.51
PTP4A1Q93096 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTP4A1Q93096 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTP4A1Q93096 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTP4A1Q93096 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTP4A1Q93096 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTP4A1Q93096 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PTP4A1Q93096 AC022164.1-201ENST00000568767 2673 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTP4A1Q93096 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTP4A1Q93096 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTP4A1Q93096 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTP4A1Q93096 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 SNORD94-201ENST00000386037 137 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTP4A1Q93096 RPL10P10-201ENST00000403509 664 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms