Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 RNA5SP273-201ENST00000362484 113 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 RNA5SP284-201ENST00000384547 118 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 RPS7P8-201ENST00000418311 581 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 CYCSP52-201ENST00000422857 310 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 NPM1P26-201ENST00000426339 738 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 PPIAP10-201ENST00000438675 458 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 FABP5P2-201ENST00000439042 408 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 MTND2P25-201ENST00000449028 610 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 CFL1P4-201ENST00000451536 498 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AC010343.2-201ENST00000510162 224 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AC090958.1-201ENST00000511122 351 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 RNA5SP434-201ENST00000516647 121 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 Y_RNA.710-201ENST00000516975 110 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 OR4A46P-201ENST00000527255 933 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AP003049.1-201ENST00000529418 457 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 CR383656.14-201ENST00000551951 406 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 RPA2P1-201ENST00000556557 721 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AC092121.1-201ENST00000569452 202 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AL359704.2-201ENST00000604335 521 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AC135803.1-201ENST00000608748 565 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AL008723.3-201ENST00000608926 449 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AC127024.6-201ENST00000621598 424 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 CLCA3P-203ENST00000490028 2781 ntBASIC6.29□□□□□ -1.4
HMGB4Q8WW32 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 NEK2P2-201ENST00000438441 1338 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 MIR323A-201ENST00000362199 86 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 RNU1-49P-201ENST00000363468 159 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 RNA5SP178-201ENST00000410380 128 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 CDY17P-201ENST00000414121 1282 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 RAB9AP4-201ENST00000415230 609 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 RPL12P12-201ENST00000424633 501 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 MTND6P12-201ENST00000428247 522 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 RPL5P11-201ENST00000498068 893 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 AC106806.2-201ENST00000509365 500 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 RNU6-491P-201ENST00000516099 110 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 RNA5SP438-201ENST00000516561 112 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 AC134349.2-201ENST00000535136 910 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms