Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 HNRNPCP1-201ENST00000556181 766 ntBASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AC002310.3-201ENST00000569728 723 ntBASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AL158211.2-201ENST00000607282 395 ntBASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AL133481.2-203ENST00000607558 139 ntBASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AL139099.4-201ENST00000614802 114 ntBASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AC022400.9-201ENST00000623633 273 ntBASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AC069542.2-201ENST00000624816 216 ntBASIC6.29□□□□□ -1.4
LMO3Q8TAP4 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AL355834.1-201ENST00000556602 3965 ntBASIC6.29□□□□□ -1.4
LMO3Q8TAP4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 PARP4P2-201ENST00000446672 3326 ntBASIC6.28□□□□□ -1.4
LMO3Q8TAP4 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 HCFC2P1-201ENST00000392864 1592 ntBASIC6.28□□□□□ -1.4
LMO3Q8TAP4 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 IFIT1P1-201ENST00000400497 1449 ntBASIC6.28□□□□□ -1.4
LMO3Q8TAP4 CAP1P2-201ENST00000417455 1409 ntBASIC6.28□□□□□ -1.4
LMO3Q8TAP4 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 TMSB4XP2-201ENST00000335179 210 ntBASIC6.28□□□□□ -1.4
LMO3Q8TAP4 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 RNA5SP91-201ENST00000390902 119 ntBASIC6.28□□□□□ -1.4
LMO3Q8TAP4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 AC023141.8-201ENST00000442554 208 ntBASIC6.28□□□□□ -1.4
LMO3Q8TAP4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 AC079080.1-201ENST00000479841 822 ntBASIC6.28□□□□□ -1.4
LMO3Q8TAP4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 AC011853.1-201ENST00000518911 454 ntBASIC6.28□□□□□ -1.4
LMO3Q8TAP4 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 BCAS2P1-201ENST00000528022 632 ntBASIC6.28□□□□□ -1.4
LMO3Q8TAP4 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 AP001357.1-201ENST00000586304 1053 ntBASIC6.28□□□□□ -1.4
LMO3Q8TAP4 AC060780.2-201ENST00000589047 198 ntBASIC6.28□□□□□ -1.4
LMO3Q8TAP4 AP000240.1-201ENST00000609910 452 ntBASIC6.28□□□□□ -1.4
LMO3Q8TAP4 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 AC021422.1-201ENST00000621212 473 ntBASIC6.28□□□□□ -1.4
LMO3Q8TAP4 AC022919.1-201ENST00000624979 626 ntBASIC6.28□□□□□ -1.4
LMO3Q8TAP4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LMO3Q8TAP4 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.27□□□□□ -1.4
LMO3Q8TAP4 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.27□□□□□ -1.4
LMO3Q8TAP4 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.4
LMO3Q8TAP4 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LMO3Q8TAP4 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
LMO3Q8TAP4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LMO3Q8TAP4 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.27□□□□□ -1.41
LMO3Q8TAP4 AL162456.1-201ENST00000634535 2006 ntBASIC6.27□□□□□ -1.41
LMO3Q8TAP4 AC140479.2-201ENST00000421567 3130 ntBASIC6.27□□□□□ -1.41
LMO3Q8TAP4 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
LMO3Q8TAP4 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
LMO3Q8TAP4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.27□□□□□ -1.41
LMO3Q8TAP4 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.27□□□□□ -1.41
LMO3Q8TAP4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.27□□□□□ -1.41
LMO3Q8TAP4 RPL6P21-201ENST00000418672 846 ntBASIC6.27□□□□□ -1.41
LMO3Q8TAP4 AK3P5-201ENST00000432033 519 ntBASIC6.27□□□□□ -1.41
LMO3Q8TAP4 AC110602.1-201ENST00000437414 318 ntBASIC6.27□□□□□ -1.41
LMO3Q8TAP4 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.27□□□□□ -1.41
LMO3Q8TAP4 TUBB4BP6-201ENST00000437576 479 ntBASIC6.27□□□□□ -1.41
LMO3Q8TAP4 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.27□□□□□ -1.41
LMO3Q8TAP4 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
LMO3Q8TAP4 AC025458.1-201ENST00000506046 166 ntBASIC6.27□□□□□ -1.41
LMO3Q8TAP4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.27□□□□□ -1.41
LMO3Q8TAP4 Y_RNA.667-201ENST00000516212 107 ntBASIC6.27□□□□□ -1.41
LMO3Q8TAP4 AP003396.4-201ENST00000527574 265 ntBASIC6.27□□□□□ -1.41
LMO3Q8TAP4 AC027369.2-201ENST00000528030 440 ntBASIC6.27□□□□□ -1.41
LMO3Q8TAP4 PCNAP4-201ENST00000532690 730 ntBASIC6.27□□□□□ -1.41
LMO3Q8TAP4 AC107958.1-201ENST00000556576 290 ntBASIC6.27□□□□□ -1.41
LMO3Q8TAP4 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.27□□□□□ -1.41
LMO3Q8TAP4 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms