Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 WDR95P-201ENST00000425638 1542 ntBASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 KYNUP3-201ENST00000574386 1341 ntBASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 LINC02019-201ENST00000608605 2060 ntBASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 DDX18P6-201ENST00000450119 1997 ntBASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 RPL12P16-201ENST00000431098 498 ntBASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 AC016027.4-201ENST00000450866 277 ntBASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 SDC4P-201ENST00000453285 601 ntBASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 HMGN1P17-201ENST00000513734 295 ntBASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 LDHBP3-201ENST00000514909 822 ntBASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 SNORA74.1-201ENST00000516320 180 ntBASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 AC119403.2-201ENST00000590960 598 ntBASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 SMIM12P1-201ENST00000603004 274 ntBASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 AC005899.6-201ENST00000620729 297 ntBASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 SNX18P12-201ENST00000624821 759 ntBASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 AC011933.2-201ENST00000578539 2790 ntBASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 AP005432.1-201ENST00000580891 3485 ntBASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CLHC1Q8NHS4 NLRP3P1-201ENST00000622303 1785 ntBASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 RN7SKP38-201ENST00000410782 309 ntBASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 RN7SKP108-201ENST00000411367 328 ntBASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 RPL35AP31-201ENST00000418340 337 ntBASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 NMD3P2-201ENST00000421815 761 ntBASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 AC097359.1-201ENST00000447946 463 ntBASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 AC004890.1-201ENST00000461005 181 ntBASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 RN7SL552P-201ENST00000462094 276 ntBASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 AC105420.1-201ENST00000504389 582 ntBASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 OR56A7P-201ENST00000524865 941 ntBASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 AC036111.2-201ENST00000533247 901 ntBASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 AC004232.2-201ENST00000574245 821 ntBASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 AC073333.2-201ENST00000603589 769 ntBASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 AL138693.1-201ENST00000622219 129 ntBASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 CDY3P-201ENST00000454543 1618 ntBASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLHC1Q8NHS4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLHC1Q8NHS4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.71□□□□□ -1.49
CLHC1Q8NHS4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.71□□□□□ -1.49
CLHC1Q8NHS4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 AC138907.8-201ENST00000623981 2256 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms