Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC245060.4-201ENST00000413293 1121 ntBASIC6.75□□□□□ -1.33
HERC6Q8IVU3 AL713922.1-201ENST00000416477 747 ntBASIC6.75□□□□□ -1.33
HERC6Q8IVU3 AC096644.3-201ENST00000416788 338 ntBASIC6.75□□□□□ -1.33
HERC6Q8IVU3 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 PPIAP10-201ENST00000438675 458 ntBASIC6.75□□□□□ -1.33
HERC6Q8IVU3 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 AC093827.1-201ENST00000480094 861 ntBASIC6.75□□□□□ -1.33
HERC6Q8IVU3 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 IGHV3-57-201ENST00000520143 280 ntBASIC6.75□□□□□ -1.33
HERC6Q8IVU3 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 AL021707.7-201ENST00000607991 416 ntBASIC6.75□□□□□ -1.33
HERC6Q8IVU3 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 AL136228.1-201ENST00000622221 319 ntBASIC6.75□□□□□ -1.33
HERC6Q8IVU3 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.75□□□□□ -1.33
HERC6Q8IVU3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 AC106872.5-201ENST00000508856 1416 ntBASIC6.75□□□□□ -1.33
HERC6Q8IVU3 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 AL929601.4-201ENST00000613011 1341 ntBASIC6.75□□□□□ -1.33
HERC6Q8IVU3 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.75□□□□□ -1.33
HERC6Q8IVU3 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 OR13C1P-202ENST00000641378 2919 ntBASIC6.74□□□□□ -1.33
HERC6Q8IVU3 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 RNU1-150P-201ENST00000362491 162 ntBASIC6.74□□□□□ -1.33
HERC6Q8IVU3 RNU1-49P-201ENST00000363468 159 ntBASIC6.74□□□□□ -1.33
HERC6Q8IVU3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 CYCSP52-201ENST00000422857 310 ntBASIC6.74□□□□□ -1.33
HERC6Q8IVU3 BX119321.1-201ENST00000428912 797 ntBASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AL139156.3-201ENST00000454802 394 ntBASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AC021269.1-201ENST00000526860 705 ntBASIC6.74□□□□□ -1.33
HERC6Q8IVU3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AC005244.1-201ENST00000582566 339 ntBASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 BNIP3P32-201ENST00000600015 554 ntBASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AL683813.2-201ENST00000605245 502 ntBASIC6.74□□□□□ -1.33
HERC6Q8IVU3 MIR6809-201ENST00000612189 116 ntBASIC6.74□□□□□ -1.33
HERC6Q8IVU3 MIR7159-201ENST00000620587 66 ntBASIC6.74□□□□□ -1.33
HERC6Q8IVU3 AC012653.2-201ENST00000621880 420 ntBASIC6.74□□□□□ -1.33
HERC6Q8IVU3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HERC6Q8IVU3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AL136531.3-201ENST00000624378 3658 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms