Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.62□□□□□ -1.35
ATG4DQ86TL0 AP005329.3-201ENST00000609924 686 ntBASIC6.62□□□□□ -1.35
ATG4DQ86TL0 AC007014.2-201ENST00000615581 479 ntBASIC6.62□□□□□ -1.35
ATG4DQ86TL0 MIR8089-201ENST00000620165 82 ntBASIC6.62□□□□□ -1.35
ATG4DQ86TL0 AP002505.2-201ENST00000623585 696 ntBASIC6.62□□□□□ -1.35
ATG4DQ86TL0 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
ATG4DQ86TL0 CASC19-212ENST00000641153 1287 ntBASIC6.62□□□□□ -1.35
ATG4DQ86TL0 OR5AU1-204ENST00000641822 1197 ntBASIC6.62□□□□□ -1.35
ATG4DQ86TL0 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
ATG4DQ86TL0 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4DQ86TL0 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4DQ86TL0 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.62□□□□□ -1.35
ATG4DQ86TL0 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4DQ86TL0 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.62□□□□□ -1.35
ATG4DQ86TL0 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4DQ86TL0 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4DQ86TL0 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.62□□□□□ -1.35
ATG4DQ86TL0 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4DQ86TL0 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.62□□□□□ -1.35
ATG4DQ86TL0 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.62□□□□□ -1.35
ATG4DQ86TL0 AL353898.3-201ENST00000624679 1755 ntBASIC6.62□□□□□ -1.35
ATG4DQ86TL0 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4DQ86TL0 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 CCDC162P-202ENST00000368966 6751 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AL353625.1-202ENST00000366273 571 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 RNU6-1005P-201ENST00000384519 107 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 TATDN1P1-201ENST00000414123 891 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 GTF2IP2-201ENST00000424290 697 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 OR6R1P-201ENST00000431838 940 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC013410.1-201ENST00000436223 1232 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 MTCYBP34-201ENST00000439552 670 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 RPS19P6-201ENST00000441327 433 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC112653.1-201ENST00000443851 386 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 SETP11-201ENST00000473027 690 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC015864.1-201ENST00000496512 544 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC008837.1-201ENST00000511513 412 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 SEC11B-201ENST00000518383 499 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC104417.1-201ENST00000523974 751 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AP001994.1-201ENST00000527539 826 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC135983.3-201ENST00000528049 1226 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC018523.1-201ENST00000534211 512 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC087257.2-201ENST00000538759 928 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 ATP5J2P4-201ENST00000538774 267 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC011611.5-201ENST00000552477 578 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 COX6CP11-201ENST00000555293 229 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AL049869.4-201ENST00000555669 178 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 MIR4789-201ENST00000577469 82 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC005730.3-201ENST00000583067 366 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC005377.1-201ENST00000605126 456 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC112220.3-201ENST00000605502 502 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AL645933.2-201ENST00000606743 1207 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AL139418.1-201ENST00000613613 177 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC009704.2-201ENST00000618739 483 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AL590396.3-201ENST00000636334 300 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms