Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC009120.3-201ENST00000563335 499 ntBASIC5.72□□□□□ -1.49
LTBQ06643 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.72□□□□□ -1.49
LTBQ06643 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LTBQ06643 MIR3189-201ENST00000578735 73 ntBASIC5.72□□□□□ -1.49
LTBQ06643 AC005332.4-201ENST00000592752 579 ntBASIC5.72□□□□□ -1.49
LTBQ06643 BNIP3P40-201ENST00000596017 556 ntBASIC5.72□□□□□ -1.49
LTBQ06643 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.72□□□□□ -1.49
LTBQ06643 AC098483.2-201ENST00000603158 454 ntBASIC5.72□□□□□ -1.49
LTBQ06643 AC013244.1-201ENST00000604279 193 ntBASIC5.72□□□□□ -1.49
LTBQ06643 GMCL1P2-201ENST00000605230 823 ntBASIC5.72□□□□□ -1.49
LTBQ06643 MIR6768-201ENST00000610734 72 ntBASIC5.72□□□□□ -1.49
LTBQ06643 AL589743.6-201ENST00000611025 117 ntBASIC5.72□□□□□ -1.49
LTBQ06643 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LTBQ06643 AC048344.4-201ENST00000619744 527 ntBASIC5.72□□□□□ -1.49
LTBQ06643 AC006927.4-201ENST00000639187 543 ntBASIC5.72□□□□□ -1.49
LTBQ06643 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LTBQ06643 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LTBQ06643 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.72□□□□□ -1.49
LTBQ06643 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LTBQ06643 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LTBQ06643 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
LTBQ06643 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
LTBQ06643 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LTBQ06643 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
LTBQ06643 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
LTBQ06643 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.71□□□□□ -1.49
LTBQ06643 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LTBQ06643 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.71□□□□□ -1.5
LTBQ06643 AL353763.1-201ENST00000624467 1628 ntBASIC5.71□□□□□ -1.5
LTBQ06643 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.71□□□□□ -1.5
LTBQ06643 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LTBQ06643 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.71□□□□□ -1.5
LTBQ06643 AC053481.2-202ENST00000582394 1500 ntBASIC5.71□□□□□ -1.5
LTBQ06643 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LTBQ06643 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LTBQ06643 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
LTBQ06643 YWHAZP4-201ENST00000392459 708 ntBASIC5.71□□□□□ -1.5
LTBQ06643 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.71□□□□□ -1.5
LTBQ06643 GTF3AP1-201ENST00000416942 1004 ntBASIC5.71□□□□□ -1.5
LTBQ06643 AL360013.1-201ENST00000419031 858 ntBASIC5.71□□□□□ -1.5
LTBQ06643 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
LTBQ06643 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.71□□□□□ -1.5
LTBQ06643 AL022237.1-201ENST00000446663 358 ntBASIC5.71□□□□□ -1.5
LTBQ06643 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.71□□□□□ -1.5
LTBQ06643 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.71□□□□□ -1.5
LTBQ06643 RPS27AP3-201ENST00000453803 454 ntBASIC5.71□□□□□ -1.5
LTBQ06643 AC103563.5-201ENST00000455643 364 ntBASIC5.71□□□□□ -1.5
LTBQ06643 RARRES2P3-201ENST00000457739 473 ntBASIC5.71□□□□□ -1.5
LTBQ06643 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
LTBQ06643 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LTBQ06643 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LTBQ06643 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.71□□□□□ -1.5
LTBQ06643 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.71□□□□□ -1.5
LTBQ06643 MTATP6P1-201ENST00000514057 681 ntBASIC5.71□□□□□ -1.5
LTBQ06643 RNA5SP418-201ENST00000515951 117 ntBASIC5.71□□□□□ -1.5
LTBQ06643 SNORA74.1-201ENST00000516320 180 ntBASIC5.71□□□□□ -1.5
LTBQ06643 AC008055.1-201ENST00000547032 609 ntBASIC5.71□□□□□ -1.5
LTBQ06643 CR383656.14-201ENST00000551951 406 ntBASIC5.71□□□□□ -1.5
LTBQ06643 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.71□□□□□ -1.5
LTBQ06643 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LTBQ06643 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.71□□□□□ -1.5
LTBQ06643 BNIP3P27-201ENST00000599991 412 ntBASIC5.71□□□□□ -1.5
LTBQ06643 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.71□□□□□ -1.5
LTBQ06643 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.71□□□□□ -1.5
LTBQ06643 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.71□□□□□ -1.5
LTBQ06643 AC079753.1-201ENST00000623243 3868 ntBASIC5.71□□□□□ -1.5
LTBQ06643 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LTBQ06643 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.71□□□□□ -1.5
LTBQ06643 MAPK10-270ENST00000641102 3538 ntBASIC5.71□□□□□ -1.5
LTBQ06643 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.71□□□□□ -1.5
LTBQ06643 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
LTBQ06643 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
LTBQ06643 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LTBQ06643 AC104966.1-201ENST00000467010 1464 ntBASIC5.71□□□□□ -1.5
LTBQ06643 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
LTBQ06643 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
LTBQ06643 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.7□□□□□ -1.5
LTBQ06643 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LTBQ06643 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.7□□□□□ -1.5
LTBQ06643 RNA5SP510-201ENST00000364697 99 ntBASIC5.7□□□□□ -1.5
LTBQ06643 MT-RNR1-201ENST00000389680 954 ntBASIC5.7□□□□□ -1.5
LTBQ06643 AC004386.1-201ENST00000393214 761 ntBASIC5.7□□□□□ -1.5
LTBQ06643 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.7□□□□□ -1.5
LTBQ06643 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 BMS1P13-201ENST00000417301 885 ntBASIC5.7□□□□□ -1.5
LTBQ06643 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
LTBQ06643 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.7□□□□□ -1.5
LTBQ06643 AC002127.1-201ENST00000421305 225 ntBASIC5.7□□□□□ -1.5
LTBQ06643 AC079355.1-201ENST00000421770 223 ntBASIC5.7□□□□□ -1.5
LTBQ06643 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 AL354692.1-201ENST00000423044 315 ntBASIC5.7□□□□□ -1.5
LTBQ06643 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBQ06643 BMS1P10-201ENST00000443754 1120 ntBASIC5.7□□□□□ -1.5
LTBQ06643 COX4I1P2-201ENST00000447446 547 ntBASIC5.7□□□□□ -1.5
LTBQ06643 VPS25P1-201ENST00000455691 508 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms