Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MTND6P2-201ENST00000512226 524 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 OR56A7P-201ENST00000524865 941 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 AC034105.4-201ENST00000568304 277 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC3.47□□□□□ -1.85
HSPG2P98160 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.47□□□□□ -1.85
HSPG2P98160 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC3.46□□□□□ -1.85
HSPG2P98160 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC3.46□□□□□ -1.85
HSPG2P98160 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC3.46□□□□□ -1.85
HSPG2P98160 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
HSPG2P98160 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC3.46□□□□□ -1.85
HSPG2P98160 NWD1-205ENST00000549814 6614 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
HSPG2P98160 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
HSPG2P98160 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC3.46□□□□□ -1.86
HSPG2P98160 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HSPG2P98160 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 ZNF473-202ENST00000391821 4715 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC3.46□□□□□ -1.86
HSPG2P98160 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.46□□□□□ -1.86
HSPG2P98160 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HSPG2P98160 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.46□□□□□ -1.86
HSPG2P98160 MIR4270-201ENST00000581799 70 ntBASIC3.46□□□□□ -1.86
HSPG2P98160 AL031320.1-201ENST00000604177 357 ntBASIC3.46□□□□□ -1.86
HSPG2P98160 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC3.46□□□□□ -1.86
HSPG2P98160 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HSPG2P98160 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
HSPG2P98160 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HSPG2P98160 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC3.46□□□□□ -1.86
HSPG2P98160 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC3.46□□□□□ -1.86
HSPG2P98160 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC3.46□□□□□ -1.86
HSPG2P98160 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
HSPG2P98160 AOX3P-204ENST00000491025 2107 ntBASIC3.46□□□□□ -1.86
HSPG2P98160 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC3.46□□□□□ -1.86
HSPG2P98160 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
HSPG2P98160 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC3.46□□□□□ -1.86
HSPG2P98160 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 NIFKP3-201ENST00000417799 865 ntBASIC3.46□□□□□ -1.86
HSPG2P98160 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.46□□□□□ -1.86
HSPG2P98160 AC105399.1-202ENST00000447303 205 ntBASIC3.46□□□□□ -1.86
HSPG2P98160 MGAT2P1-201ENST00000449718 797 ntBASIC3.46□□□□□ -1.86
HSPG2P98160 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC3.46□□□□□ -1.86
HSPG2P98160 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC3.46□□□□□ -1.86
HSPG2P98160 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC3.46□□□□□ -1.86
HSPG2P98160 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.46□□□□□ -1.86
HSPG2P98160 AC021006.3-201ENST00000530771 192 ntBASIC3.46□□□□□ -1.86
HSPG2P98160 OR4A40P-201ENST00000533878 948 ntBASIC3.46□□□□□ -1.86
HSPG2P98160 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 AL031123.3-201ENST00000623345 1837 ntBASIC3.46□□□□□ -1.86
HSPG2P98160 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
HSPG2P98160 AL449283.1-201ENST00000602631 3403 ntBASIC3.46□□□□□ -1.86
HSPG2P98160 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 ADD2-201ENST00000264436 9267 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC3.46□□□□□ -1.86
HSPG2P98160 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC3.46□□□□□ -1.86
HSPG2P98160 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 MYO5A-205ENST00000399231 12225 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 SNORA67-201ENST00000384423 137 ntBASIC3.46□□□□□ -1.86
HSPG2P98160 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.46□□□□□ -1.86
HSPG2P98160 MAL2-207ENST00000522828 603 ntTSL 3 BASIC3.46□□□□□ -1.86
HSPG2P98160 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HSPG2P98160 AP005432.2-201ENST00000608162 586 ntBASIC3.46□□□□□ -1.86
HSPG2P98160 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC3.46□□□□□ -1.86
HSPG2P98160 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HSPG2P98160 AC083902.2-201ENST00000511828 10086 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC3.45□□□□□ -1.86
HSPG2P98160 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC3.45□□□□□ -1.86
HSPG2P98160 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HSPG2P98160 ATP2B2-203ENST00000383800 8900 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC3.45□□□□□ -1.86
HSPG2P98160 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC3.45□□□□□ -1.86
HSPG2P98160 TRAK2-201ENST00000332624 6510 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 CPS1-IT1-201ENST00000628368 2306 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 ACACB-202ENST00000377848 9247 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 NUDT19P3-201ENST00000404698 555 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HSPG2P98160 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC3.45□□□□□ -1.86
HSPG2P98160 AC211486.3-201ENST00000412694 621 ntBASIC3.45□□□□□ -1.86
HSPG2P98160 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC3.45□□□□□ -1.86
HSPG2P98160 EEF1A1P1-201ENST00000447052 739 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms