Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.59□□□□□ -1.35
CLCN3P51790 AC079600.1-201ENST00000550326 297 ntBASIC6.59□□□□□ -1.35
CLCN3P51790 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.59□□□□□ -1.35
CLCN3P51790 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.59□□□□□ -1.35
CLCN3P51790 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.59□□□□□ -1.35
CLCN3P51790 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.59□□□□□ -1.35
CLCN3P51790 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.59□□□□□ -1.35
CLCN3P51790 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.59□□□□□ -1.35
CLCN3P51790 AC027334.1-201ENST00000603257 310 ntBASIC6.59□□□□□ -1.35
CLCN3P51790 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.59□□□□□ -1.35
CLCN3P51790 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.59□□□□□ -1.35
CLCN3P51790 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CLCN3P51790 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.59□□□□□ -1.35
CLCN3P51790 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CLCN3P51790 AC016583.1-201ENST00000624221 2431 ntBASIC6.59□□□□□ -1.35
CLCN3P51790 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.59□□□□□ -1.35
CLCN3P51790 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CLCN3P51790 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.59□□□□□ -1.36
CLCN3P51790 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
CLCN3P51790 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CLCN3P51790 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CLCN3P51790 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.59□□□□□ -1.36
CLCN3P51790 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.36
CLCN3P51790 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.59□□□□□ -1.36
CLCN3P51790 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.58□□□□□ -1.36
CLCN3P51790 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CLCN3P51790 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.58□□□□□ -1.36
CLCN3P51790 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLCN3P51790 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLCN3P51790 AC007342.9-201ENST00000623877 1385 ntBASIC6.58□□□□□ -1.36
CLCN3P51790 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CLCN3P51790 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.58□□□□□ -1.36
CLCN3P51790 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CLCN3P51790 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.58□□□□□ -1.36
CLCN3P51790 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.58□□□□□ -1.36
CLCN3P51790 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLCN3P51790 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CLCN3P51790 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CLCN3P51790 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CLCN3P51790 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.58□□□□□ -1.36
CLCN3P51790 EEF1B2P8-201ENST00000414101 671 ntBASIC6.58□□□□□ -1.36
CLCN3P51790 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.58□□□□□ -1.36
CLCN3P51790 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.58□□□□□ -1.36
CLCN3P51790 CHEK2P5-201ENST00000423877 246 ntBASIC6.58□□□□□ -1.36
CLCN3P51790 AC126120.1-201ENST00000431082 470 ntBASIC6.58□□□□□ -1.36
CLCN3P51790 UBE2V2P3-201ENST00000433562 437 ntBASIC6.58□□□□□ -1.36
CLCN3P51790 ARL4AP4-201ENST00000434170 518 ntBASIC6.58□□□□□ -1.36
CLCN3P51790 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.58□□□□□ -1.36
CLCN3P51790 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.58□□□□□ -1.36
CLCN3P51790 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.58□□□□□ -1.36
CLCN3P51790 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.58□□□□□ -1.36
CLCN3P51790 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC6.58□□□□□ -1.36
CLCN3P51790 RNU6-964P-201ENST00000516524 69 ntBASIC6.58□□□□□ -1.36
CLCN3P51790 MTND2P7-201ENST00000521337 640 ntBASIC6.58□□□□□ -1.36
CLCN3P51790 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.58□□□□□ -1.36
CLCN3P51790 AC135626.1-201ENST00000556983 435 ntBASIC6.58□□□□□ -1.36
CLCN3P51790 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
CLCN3P51790 AC010615.3-201ENST00000597319 394 ntBASIC6.58□□□□□ -1.36
CLCN3P51790 FAM27E4-201ENST00000605259 342 ntBASIC6.58□□□□□ -1.36
CLCN3P51790 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.58□□□□□ -1.36
CLCN3P51790 AC004836.1-201ENST00000623032 634 ntBASIC6.58□□□□□ -1.36
CLCN3P51790 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.58□□□□□ -1.36
CLCN3P51790 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.58□□□□□ -1.36
CLCN3P51790 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CLCN3P51790 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CLCN3P51790 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.58□□□□□ -1.36
CLCN3P51790 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLCN3P51790 AC106872.5-201ENST00000508856 1416 ntBASIC6.58□□□□□ -1.36
CLCN3P51790 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CLCN3P51790 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLCN3P51790 AL353763.1-201ENST00000624467 1628 ntBASIC6.58□□□□□ -1.36
CLCN3P51790 AL121768.1-201ENST00000613917 2544 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLCN3P51790 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CLCN3P51790 OR4G1P-202ENST00000641173 1788 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLCN3P51790 AC233968.1-201ENST00000611212 1300 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CLCN3P51790 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CLCN3P51790 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CLCN3P51790 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLCN3P51790 AC016739.1-201ENST00000405359 345 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.57□□□□□ -1.36
CLCN3P51790 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.57□□□□□ -1.36
CLCN3P51790 BX119321.1-201ENST00000428912 797 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.57□□□□□ -1.36
CLCN3P51790 HMGN1P36-201ENST00000446623 298 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.57□□□□□ -1.36
CLCN3P51790 SDC4P-201ENST00000453285 601 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 AC093166.4-201ENST00000457867 318 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 RN7SL273P-201ENST00000481561 299 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.57□□□□□ -1.36
CLCN3P51790 RNU6-751P-201ENST00000516382 101 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 IGLV3-30-201ENST00000524362 298 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.57□□□□□ -1.36
CLCN3P51790 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.57□□□□□ -1.36
CLCN3P51790 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLCN3P51790 AC009237.12-201ENST00000604755 742 ntBASIC6.57□□□□□ -1.36
CLCN3P51790 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms