Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 GAPDHP71-201ENST00000511530 1003 ntBASIC7.58□□□□□ -1.2
COL15A1P39059 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.58□□□□□ -1.2
COL15A1P39059 SNORA26.10-201ENST00000516427 141 ntBASIC7.58□□□□□ -1.2
COL15A1P39059 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC7.58□□□□□ -1.2
COL15A1P39059 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.58□□□□□ -1.2
COL15A1P39059 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.58□□□□□ -1.2
COL15A1P39059 AL035661.1-201ENST00000620459 1144 ntBASIC7.58□□□□□ -1.2
COL15A1P39059 AC022919.1-201ENST00000624979 626 ntBASIC7.58□□□□□ -1.2
COL15A1P39059 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.58□□□□□ -1.2
COL15A1P39059 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL15A1P39059 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.57□□□□□ -1.2
COL15A1P39059 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.57□□□□□ -1.2
COL15A1P39059 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.57□□□□□ -1.2
COL15A1P39059 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL15A1P39059 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL15A1P39059 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.57□□□□□ -1.2
COL15A1P39059 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL15A1P39059 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL15A1P39059 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
COL15A1P39059 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL15A1P39059 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.57□□□□□ -1.2
COL15A1P39059 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL15A1P39059 RNU6-167P-201ENST00000384292 106 ntBASIC7.57□□□□□ -1.2
COL15A1P39059 MIR105-2-201ENST00000385083 81 ntBASIC7.57□□□□□ -1.2
COL15A1P39059 DPPA2P3-201ENST00000411853 655 ntBASIC7.57□□□□□ -1.2
COL15A1P39059 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL15A1P39059 TRGV5P-201ENST00000419915 354 ntBASIC7.57□□□□□ -1.2
COL15A1P39059 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.57□□□□□ -1.2
COL15A1P39059 AL662874.1-201ENST00000426065 230 ntBASIC7.57□□□□□ -1.2
COL15A1P39059 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
COL15A1P39059 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.57□□□□□ -1.2
COL15A1P39059 AC112187.1-201ENST00000455837 479 ntBASIC7.57□□□□□ -1.2
COL15A1P39059 SIAH1P1-201ENST00000479411 923 ntBASIC7.57□□□□□ -1.2
COL15A1P39059 AC109481.1-201ENST00000509173 282 ntBASIC7.57□□□□□ -1.2
COL15A1P39059 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.57□□□□□ -1.2
COL15A1P39059 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.57□□□□□ -1.2
COL15A1P39059 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.57□□□□□ -1.2
COL15A1P39059 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.57□□□□□ -1.2
COL15A1P39059 IGLV3-30-201ENST00000524362 298 ntBASIC7.57□□□□□ -1.2
COL15A1P39059 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC7.57□□□□□ -1.2
COL15A1P39059 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC7.57□□□□□ -1.2
COL15A1P39059 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.57□□□□□ -1.2
COL15A1P39059 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC7.57□□□□□ -1.2
COL15A1P39059 DPPA2P4-201ENST00000563717 878 ntBASIC7.57□□□□□ -1.2
COL15A1P39059 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
COL15A1P39059 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL15A1P39059 GMFG-212ENST00000602185 423 ntTSL 3 BASIC7.57□□□□□ -1.2
COL15A1P39059 AC027334.1-201ENST00000603257 310 ntBASIC7.57□□□□□ -1.2
COL15A1P39059 IMMP1LP3-201ENST00000604197 224 ntBASIC7.57□□□□□ -1.2
COL15A1P39059 AC239803.2-201ENST00000610161 430 ntBASIC7.57□□□□□ -1.2
COL15A1P39059 CU639417.4-201ENST00000623928 207 ntBASIC7.57□□□□□ -1.2
COL15A1P39059 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.57□□□□□ -1.2
COL15A1P39059 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.57□□□□□ -1.2
COL15A1P39059 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL15A1P39059 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.57□□□□□ -1.2
COL15A1P39059 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL15A1P39059 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
COL15A1P39059 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
COL15A1P39059 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
COL15A1P39059 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
COL15A1P39059 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
COL15A1P39059 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.56□□□□□ -1.2
COL15A1P39059 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.56□□□□□ -1.2
COL15A1P39059 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL15A1P39059 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL15A1P39059 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL15A1P39059 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.56□□□□□ -1.2
COL15A1P39059 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL15A1P39059 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL15A1P39059 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
COL15A1P39059 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.56□□□□□ -1.2
COL15A1P39059 NR1H5P-201ENST00000452683 1377 ntBASIC7.56□□□□□ -1.2
COL15A1P39059 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.56□□□□□ -1.2
COL15A1P39059 MRPL53P1-201ENST00000414323 319 ntBASIC7.56□□□□□ -1.2
COL15A1P39059 AC007562.1-201ENST00000421819 517 ntBASIC7.56□□□□□ -1.2
COL15A1P39059 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
COL15A1P39059 UBE2V2P3-201ENST00000433562 437 ntBASIC7.56□□□□□ -1.2
COL15A1P39059 AC023274.2-201ENST00000445264 521 ntBASIC7.56□□□□□ -1.2
COL15A1P39059 RN7SL72P-201ENST00000460697 269 ntBASIC7.56□□□□□ -1.2
COL15A1P39059 UBA52P7-201ENST00000486088 380 ntBASIC7.56□□□□□ -1.2
COL15A1P39059 AC108693.1-201ENST00000496068 432 ntBASIC7.56□□□□□ -1.2
COL15A1P39059 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC7.56□□□□□ -1.2
COL15A1P39059 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC7.56□□□□□ -1.2
COL15A1P39059 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.56□□□□□ -1.2
COL15A1P39059 MIR3908-201ENST00000579798 126 ntBASIC7.56□□□□□ -1.2
COL15A1P39059 BNIP3P32-201ENST00000600015 554 ntBASIC7.56□□□□□ -1.2
COL15A1P39059 AC211433.2-201ENST00000608433 387 ntBASIC7.56□□□□□ -1.2
COL15A1P39059 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.56□□□□□ -1.2
COL15A1P39059 AP001885.1-201ENST00000621658 558 ntBASIC7.56□□□□□ -1.2
COL15A1P39059 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.56□□□□□ -1.2
COL15A1P39059 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL15A1P39059 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
COL15A1P39059 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL15A1P39059 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.55□□□□□ -1.2
COL15A1P39059 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL15A1P39059 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL15A1P39059 OLMALINC-203ENST00000641087 3779 ntBASIC7.55□□□□□ -1.2
COL15A1P39059 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL15A1P39059 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL15A1P39059 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms