Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RFC4P35249 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.5□□□□□ -1.21
RFC4P35249 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
RFC4P35249 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.5□□□□□ -1.21
RFC4P35249 AC097721.1-201ENST00000427150 1253 ntBASIC7.5□□□□□ -1.21
RFC4P35249 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.5□□□□□ -1.21
RFC4P35249 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.5□□□□□ -1.21
RFC4P35249 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.5□□□□□ -1.21
RFC4P35249 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.5□□□□□ -1.21
RFC4P35249 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.5□□□□□ -1.21
RFC4P35249 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.5□□□□□ -1.21
RFC4P35249 OR6M2P-201ENST00000529831 871 ntBASIC7.5□□□□□ -1.21
RFC4P35249 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
RFC4P35249 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC7.5□□□□□ -1.21
RFC4P35249 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.5□□□□□ -1.21
RFC4P35249 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.5□□□□□ -1.21
RFC4P35249 DPPA2P4-201ENST00000563717 878 ntBASIC7.5□□□□□ -1.21
RFC4P35249 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.5□□□□□ -1.21
RFC4P35249 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.5□□□□□ -1.21
RFC4P35249 AL359513.1-201ENST00000614364 557 ntBASIC7.5□□□□□ -1.21
RFC4P35249 AC022726.2-201ENST00000634673 547 ntBASIC7.5□□□□□ -1.21
RFC4P35249 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
RFC4P35249 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
RFC4P35249 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RFC4P35249 AC092821.3-202ENST00000641304 2767 ntBASIC7.5□□□□□ -1.21
RFC4P35249 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
RFC4P35249 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
RFC4P35249 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC7.5□□□□□ -1.21
RFC4P35249 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.5□□□□□ -1.21
RFC4P35249 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.5□□□□□ -1.21
RFC4P35249 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.5□□□□□ -1.21
RFC4P35249 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFC4P35249 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.49□□□□□ -1.21
RFC4P35249 YES1P1-201ENST00000418510 1628 ntBASIC7.49□□□□□ -1.21
RFC4P35249 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFC4P35249 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFC4P35249 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.49□□□□□ -1.21
RFC4P35249 AL591848.4-201ENST00000567832 3472 ntBASIC7.49□□□□□ -1.21
RFC4P35249 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFC4P35249 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
RFC4P35249 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.49□□□□□ -1.21
RFC4P35249 RPS4XP5-201ENST00000419038 768 ntBASIC7.49□□□□□ -1.21
RFC4P35249 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.49□□□□□ -1.21
RFC4P35249 RN7SL826P-201ENST00000479724 288 ntBASIC7.49□□□□□ -1.21
RFC4P35249 AC004815.1-201ENST00000484185 331 ntBASIC7.49□□□□□ -1.21
RFC4P35249 RN7SL547P-201ENST00000490793 290 ntBASIC7.49□□□□□ -1.21
RFC4P35249 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.49□□□□□ -1.21
RFC4P35249 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.49□□□□□ -1.21
RFC4P35249 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.49□□□□□ -1.21
RFC4P35249 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.49□□□□□ -1.21
RFC4P35249 AC119403.2-201ENST00000590960 598 ntBASIC7.49□□□□□ -1.21
RFC4P35249 AC145423.1-201ENST00000605712 336 ntBASIC7.49□□□□□ -1.21
RFC4P35249 AC022919.1-201ENST00000624979 626 ntBASIC7.49□□□□□ -1.21
RFC4P35249 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC7.49□□□□□ -1.21
RFC4P35249 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFC4P35249 PABPC1P6-201ENST00000445594 1829 ntBASIC7.49□□□□□ -1.21
RFC4P35249 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFC4P35249 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFC4P35249 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RFC4P35249 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.49□□□□□ -1.21
RFC4P35249 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.49□□□□□ -1.21
RFC4P35249 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFC4P35249 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFC4P35249 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFC4P35249 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFC4P35249 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFC4P35249 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFC4P35249 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
RFC4P35249 TNPO1P2-201ENST00000426249 2665 ntBASIC7.48□□□□□ -1.21
RFC4P35249 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.48□□□□□ -1.21
RFC4P35249 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFC4P35249 MIR640-201ENST00000385086 96 ntBASIC7.48□□□□□ -1.21
RFC4P35249 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFC4P35249 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.48□□□□□ -1.21
RFC4P35249 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.48□□□□□ -1.21
RFC4P35249 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.48□□□□□ -1.21
RFC4P35249 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC7.48□□□□□ -1.21
RFC4P35249 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.48□□□□□ -1.21
RFC4P35249 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.48□□□□□ -1.21
RFC4P35249 RPL35AP19-201ENST00000469425 329 ntBASIC7.48□□□□□ -1.21
RFC4P35249 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
RFC4P35249 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
RFC4P35249 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.48□□□□□ -1.21
RFC4P35249 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.48□□□□□ -1.21
RFC4P35249 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.48□□□□□ -1.21
RFC4P35249 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.48□□□□□ -1.21
RFC4P35249 AC013731.1-201ENST00000604340 883 ntBASIC7.48□□□□□ -1.21
RFC4P35249 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFC4P35249 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC7.48□□□□□ -1.21
RFC4P35249 AC003992.1-201ENST00000635364 557 ntBASIC7.48□□□□□ -1.21
RFC4P35249 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.48□□□□□ -1.21
RFC4P35249 CASC19-264ENST00000641912 1184 ntBASIC7.48□□□□□ -1.21
RFC4P35249 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
RFC4P35249 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFC4P35249 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFC4P35249 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
RFC4P35249 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFC4P35249 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFC4P35249 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFC4P35249 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms