Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
RXRBP28702 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
RXRBP28702 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
RXRBP28702 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
RXRBP28702 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
RXRBP28702 AL590762.1-201ENST00000391782 432 ntBASIC8.42□□□□□ -1.06
RXRBP28702 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC8.42□□□□□ -1.06
RXRBP28702 RN7SKP121-201ENST00000410842 305 ntBASIC8.42□□□□□ -1.06
RXRBP28702 RPL23AP27-201ENST00000415161 451 ntBASIC8.42□□□□□ -1.06
RXRBP28702 AL807761.1-201ENST00000417622 171 ntBASIC8.42□□□□□ -1.06
RXRBP28702 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC8.42□□□□□ -1.06
RXRBP28702 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC8.42□□□□□ -1.06
RXRBP28702 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC8.42□□□□□ -1.06
RXRBP28702 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC8.42□□□□□ -1.06
RXRBP28702 AZGP1P2-201ENST00000454506 345 ntBASIC8.42□□□□□ -1.06
RXRBP28702 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC8.42□□□□□ -1.06
RXRBP28702 AC005532.2-201ENST00000467154 373 ntBASIC8.42□□□□□ -1.06
RXRBP28702 UBA52P7-201ENST00000486088 380 ntBASIC8.42□□□□□ -1.06
RXRBP28702 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC8.42□□□□□ -1.06
RXRBP28702 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC8.42□□□□□ -1.06
RXRBP28702 WBP1LP3-201ENST00000523033 208 ntBASIC8.42□□□□□ -1.06
RXRBP28702 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC8.42□□□□□ -1.06
RXRBP28702 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RXRBP28702 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC8.42□□□□□ -1.06
RXRBP28702 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC8.42□□□□□ -1.06
RXRBP28702 HAUS8P1-201ENST00000549005 542 ntBASIC8.42□□□□□ -1.06
RXRBP28702 AGGF1P7-201ENST00000562369 913 ntBASIC8.42□□□□□ -1.06
RXRBP28702 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC8.42□□□□□ -1.06
RXRBP28702 MTATP6P2-201ENST00000603319 678 ntBASIC8.42□□□□□ -1.06
RXRBP28702 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC8.42□□□□□ -1.06
RXRBP28702 AC011939.3-201ENST00000613686 466 ntBASIC8.42□□□□□ -1.06
RXRBP28702 AC026951.2-201ENST00000613847 241 ntBASIC8.42□□□□□ -1.06
RXRBP28702 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC8.42□□□□□ -1.06
RXRBP28702 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC8.42□□□□□ -1.06
RXRBP28702 AC132825.7-201ENST00000638744 335 ntBASIC8.42□□□□□ -1.06
RXRBP28702 NR1H5P-201ENST00000452683 1377 ntBASIC8.42□□□□□ -1.06
RXRBP28702 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
RXRBP28702 AL136984.1-201ENST00000607611 1893 ntBASIC8.42□□□□□ -1.06
RXRBP28702 AC079777.1-201ENST00000623836 1953 ntBASIC8.42□□□□□ -1.06
RXRBP28702 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
RXRBP28702 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RXRBP28702 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.42□□□□□ -1.06
RXRBP28702 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RXRBP28702 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RXRBP28702 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RXRBP28702 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.42□□□□□ -1.06
RXRBP28702 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RXRBP28702 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
RXRBP28702 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 AC138627.1-203ENST00000641872 1680 ntBASIC8.41□□□□□ -1.06
RXRBP28702 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC8.41□□□□□ -1.06
RXRBP28702 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
RXRBP28702 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC8.41□□□□□ -1.06
RXRBP28702 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC8.41□□□□□ -1.06
RXRBP28702 RBMY1HP-201ENST00000382759 1389 ntBASIC8.41□□□□□ -1.06
RXRBP28702 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.41□□□□□ -1.06
RXRBP28702 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
RXRBP28702 SNORD16-201ENST00000362803 99 ntBASIC8.41□□□□□ -1.06
RXRBP28702 RNU6-891P-201ENST00000384280 111 ntBASIC8.41□□□□□ -1.06
RXRBP28702 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 OR7E101P-201ENST00000400428 513 ntBASIC8.41□□□□□ -1.06
RXRBP28702 AC022028.1-201ENST00000412054 408 ntBASIC8.41□□□□□ -1.06
RXRBP28702 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC8.41□□□□□ -1.06
RXRBP28702 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC8.41□□□□□ -1.06
RXRBP28702 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC8.41□□□□□ -1.06
RXRBP28702 TRAPPC13P1-201ENST00000435991 1062 ntBASIC8.41□□□□□ -1.06
RXRBP28702 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC8.41□□□□□ -1.06
RXRBP28702 EEF1B2P5-201ENST00000444820 548 ntBASIC8.41□□□□□ -1.06
RXRBP28702 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC8.41□□□□□ -1.06
RXRBP28702 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 AC103563.5-201ENST00000455643 364 ntBASIC8.41□□□□□ -1.06
RXRBP28702 AC011225.1-201ENST00000457751 369 ntBASIC8.41□□□□□ -1.06
RXRBP28702 AC115223.1-201ENST00000466377 870 ntBASIC8.41□□□□□ -1.06
RXRBP28702 RN7SL326P-201ENST00000477493 296 ntBASIC8.41□□□□□ -1.06
RXRBP28702 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC8.41□□□□□ -1.06
RXRBP28702 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC8.41□□□□□ -1.06
RXRBP28702 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC8.41□□□□□ -1.06
RXRBP28702 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC8.41□□□□□ -1.06
RXRBP28702 AC134698.4-201ENST00000523451 826 ntBASIC8.41□□□□□ -1.06
RXRBP28702 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC8.41□□□□□ -1.06
RXRBP28702 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC8.41□□□□□ -1.06
RXRBP28702 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC8.41□□□□□ -1.06
RXRBP28702 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC8.41□□□□□ -1.06
RXRBP28702 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC8.41□□□□□ -1.06
RXRBP28702 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC8.41□□□□□ -1.06
RXRBP28702 AL445222.1-201ENST00000607259 628 ntBASIC8.41□□□□□ -1.06
RXRBP28702 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC8.41□□□□□ -1.06
RXRBP28702 AC090510.2-201ENST00000617465 629 ntBASIC8.41□□□□□ -1.06
RXRBP28702 AL445493.3-201ENST00000619568 477 ntBASIC8.41□□□□□ -1.06
RXRBP28702 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC8.41□□□□□ -1.06
RXRBP28702 AC084824.4-201ENST00000620106 731 ntBASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms