Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL359976.1-201ENST00000418655 3528 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ABCD3P28288 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ABCD3P28288 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ABCD3P28288 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.87□□□□□ -1.47
ABCD3P28288 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ABCD3P28288 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ABCD3P28288 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ABCD3P28288 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.87□□□□□ -1.47
ABCD3P28288 RNU6-729P-201ENST00000384399 107 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ABCD3P28288 AL034403.1-201ENST00000399414 885 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 AL356057.1-202ENST00000402263 756 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
ABCD3P28288 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.87□□□□□ -1.47
ABCD3P28288 THEM7P-201ENST00000419556 672 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.87□□□□□ -1.47
ABCD3P28288 AC097721.1-201ENST00000427150 1253 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.87□□□□□ -1.47
ABCD3P28288 RPSAP32-201ENST00000432681 526 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.87□□□□□ -1.47
ABCD3P28288 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.87□□□□□ -1.47
ABCD3P28288 XKRY2-201ENST00000442362 1093 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 AC007000.2-201ENST00000442564 487 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.87□□□□□ -1.47
ABCD3P28288 AC007383.1-201ENST00000445875 636 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.87□□□□□ -1.47
ABCD3P28288 RARRES2P3-201ENST00000457739 473 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 SNX18P26-201ENST00000458433 740 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 H3F3AP5-201ENST00000475267 429 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.87□□□□□ -1.47
ABCD3P28288 RN7SL714P-201ENST00000487050 298 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 RN7SL568P-201ENST00000493069 298 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.87□□□□□ -1.47
ABCD3P28288 HMGN1P16-201ENST00000508308 283 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 AC021146.7-201ENST00000509604 775 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 AC025768.1-201ENST00000510057 267 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.87□□□□□ -1.47
ABCD3P28288 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.87□□□□□ -1.47
ABCD3P28288 IGHV4-55-201ENST00000520889 368 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.87□□□□□ -1.47
ABCD3P28288 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.87□□□□□ -1.47
ABCD3P28288 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.87□□□□□ -1.47
ABCD3P28288 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.87□□□□□ -1.47
ABCD3P28288 AC073916.1-201ENST00000545095 130 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 AC009729.1-201ENST00000548873 1133 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 AL121579.2-201ENST00000555466 590 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.87□□□□□ -1.47
ABCD3P28288 AC233702.7-202ENST00000582941 211 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.87□□□□□ -1.47
ABCD3P28288 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ABCD3P28288 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ABCD3P28288 RPL12P48-201ENST00000605620 304 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 SNORA74.4-201ENST00000607595 199 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 AL008723.3-201ENST00000608926 449 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 MIR6889-201ENST00000613185 59 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.87□□□□□ -1.47
ABCD3P28288 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 SAMMSON-210ENST00000641260 1308 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
ABCD3P28288 MSL3P1-202ENST00000440028 1468 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
ABCD3P28288 AC110792.3-201ENST00000595906 1614 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 HSPD1P7-201ENST00000447985 1686 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.87□□□□□ -1.47
ABCD3P28288 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ABCD3P28288 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ABCD3P28288 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ABCD3P28288 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ABCD3P28288 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ABCD3P28288 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
ABCD3P28288 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ABCD3P28288 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.87□□□□□ -1.47
ABCD3P28288 AC009779.8-201ENST00000641684 4384 ntBASIC5.87□□□□□ -1.47
ABCD3P28288 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.87□□□□□ -1.47
ABCD3P28288 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ABCD3P28288 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
ABCD3P28288 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ABCD3P28288 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ABCD3P28288 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
ABCD3P28288 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ABCD3P28288 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ABCD3P28288 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.86□□□□□ -1.47
ABCD3P28288 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ABCD3P28288 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
ABCD3P28288 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.86□□□□□ -1.47
ABCD3P28288 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ABCD3P28288 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.86□□□□□ -1.47
ABCD3P28288 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ABCD3P28288 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ABCD3P28288 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
ABCD3P28288 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ABCD3P28288 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.86□□□□□ -1.47
ABCD3P28288 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.86□□□□□ -1.47
ABCD3P28288 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.86□□□□□ -1.47
ABCD3P28288 AL512283.1-201ENST00000606756 1384 ntBASIC5.86□□□□□ -1.47
ABCD3P28288 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.86□□□□□ -1.47
ABCD3P28288 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.86□□□□□ -1.47
ABCD3P28288 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ABCD3P28288 STAG3L4-201ENST00000352103 530 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms