Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC097486.1-201ENST00000515331 210 ntBASIC4.59□□□□□ -1.67
HLA-DMBP28068 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 AC005632.2-201ENST00000564271 828 ntBASIC4.59□□□□□ -1.67
HLA-DMBP28068 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 AC097641.3-201ENST00000613523 464 ntBASIC4.59□□□□□ -1.67
HLA-DMBP28068 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 MAPK10-350ENST00000641777 965 ntBASIC4.59□□□□□ -1.67
HLA-DMBP28068 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DMBP28068 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
HLA-DMBP28068 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DMBP28068 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DMBP28068 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
HLA-DMBP28068 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DMBP28068 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DMBP28068 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DMBP28068 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DMBP28068 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMBP28068 AL049634.1-201ENST00000453770 1720 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 AC011416.1-201ENST00000514947 1732 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMBP28068 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMBP28068 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMBP28068 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMBP28068 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMBP28068 PEX12P1-201ENST00000400284 1048 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 AC108479.1-201ENST00000431142 427 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 PSMD10P2-201ENST00000432890 672 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 GAPDHP59-201ENST00000435908 267 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 AL390879.1-201ENST00000439143 386 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 AC068491.1-201ENST00000449539 1241 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 RN7SL104P-201ENST00000498686 293 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 RN7SKP288-201ENST00000516227 268 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 AC021269.1-201ENST00000526860 705 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 BCAS2P1-201ENST00000528022 632 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 AC084121.1-201ENST00000533882 835 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 AC244502.2-201ENST00000543361 851 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 MIR4502-201ENST00000580432 81 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMBP28068 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 SMIM12P1-201ENST00000603004 274 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 SNORA74.4-201ENST00000607595 199 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 MIR6071-201ENST00000616741 78 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 AC016583.1-201ENST00000624221 2431 ntBASIC4.58□□□□□ -1.68
HLA-DMBP28068 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMBP28068 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMBP28068 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMBP28068 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMBP28068 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DMBP28068 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMBP28068 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMBP28068 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMBP28068 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMBP28068 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DMBP28068 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 AC239868.2-201ENST00000564237 4527 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DMBP28068 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 AC005261.2-201ENST00000593427 4258 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DMBP28068 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DMBP28068 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms